Evidence map›Paper›PMID 33104139›Full record

ReviewNatural product reports2020

Bridging the gap between natural product synthesis and drug discovery.

Nathanyal J Truax, Daniel Romo

Abstract readReview
In one paragraph

Review in Natural product reports, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 26 papers.

0numbers the graph read from it
0cells of the map it votes in
26citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

26 citing papers in PubMed.

  1. Article
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  16. Halimanes and cancer:Frontiers in chemistry · 2023
    Review
  17. Article
  18. Article
  19. Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors.

Nathanyal J TruaxDepartment of Chemistry & Biochemistry, Baylor University, Waco, Texas 76710, USA. Daniel_Romo@baylor.edu Nathanyal_Truax1@baylor.edu.
Daniel Romo

Funding

Synthetic/Mechanistic Studies of Bioactive Marine AgentsR37GM052964 · NIGMS · TEXAS A&M UNIVERSITY · PI ROMO, DANIEL · 2009 to 2019
$3.6M
Pharmacophore-Directed  Retrosynthesis Applied to Bioactive Natural Products Informing Mechanism of Action StudiesR35GM134910 · NIGMS · BAYLOR UNIVERSITY · PI DANIEL ROMO · 2020 to 2026
$2.7M
SYNTHETIC/MECHANISTIC STUDIES OF BIOACTIVE MARINE AGENTSR01GM052964 · NIGMS · TEXAS A&M UNIVERSITY SYSTEM · PI ROMO, DANIEL · 2000 to 2008
$2.4M
Pharmacophore Directed Retrosynthesis Toward the Anti-Inflammatory Agent Rameswaralide and Anti-Cancer Agent IneleganolideF31CA239560 · NCI · BAYLOR UNIVERSITY · PI TRUAX, NATHANYAL J · 2019 to 2022
$145k
STRUCTURAL/SYNTHETIC STUDIES OF BIOACTIVE MARINE AGENTSR29GM052964 · NIGMS · TEXAS A&M UNIVERSITY SYSTEM · PI ROMO, DANIEL · 1995 to 1999
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NCI NIH HHS F31 CA239560NIGMS NIH HHS R01 GM052964NIGMS NIH HHS R29 GM052964NIGMS NIH HHS R35 GM134910NIGMS NIH HHS R37 GM052964
6 · The paper itself

Abstract

Covering: 1986 to 2020Natural products are an enduring source of chemical information useful for probing biologically relevant chemical space. Toward gathering further structure-activity relationship (SAR) information for a particular natural product, synthetic chemists traditionally proceeded first by a total synthesis effort followed by the synthesis of simplified derivatives. While this approach has proven fruitful, it often does not incorporate hypotheses regarding structural features necessary for bioactivity at the synthetic planning stage, but rather focuses on the rapid assembly of the targeted natural product; a goal that often supersedes the opportunity to gather SAR information en route to the natural product. Furthermore, access to simplified variants of a natural product possessing only the proposed essential structural features necessary for bioactivity, typically at lower oxidation states overall, is sometimes non-trivial from the original established synthetic route. In recent years, several synthetic design strategies were described to streamline the process of finding bioactive molecules in concert with fathering further SAR studies for targeted natural products. This review article will briefly discuss traditional retrosynthetic strategies and contrast them to selected examples of recent synthetic strategies for the investigation of biologically relevant chemical space revealed by natural products. These strategies include: diversity-oriented synthesis (DOS), biology-oriented synthesis (BIOS), diverted-total synthesis (DTS), analogue-oriented synthesis (AOS), two-phase synthesis, function-oriented synthesis (FOS), and computed affinity/dynamically ordered retrosynthesis (CANDOR). Finally, a description of pharmacophore-directed retrosynthesis (PDR) developed in our laboratory and initial applications will be presented that was initially inspired by a retrospective analysis of our synthetic route to pateamine A completed in 1998.

Indexed as

Drug DiscoveryBiological ProductsMolecular ProbesMolecular StructureSmall Molecule LibrariesStructure-Activity RelationshipBiological ProductsMolecular ProbesSmall Molecule Libraries

Identifiers

PMID33104139
PMCPMC7718793

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.