Evidence map›Paper›PMID 33101359›Full record

ArticleFrontiers in genetics2020

Expression of Calcification and Extracellular Matrix Genes in the Cardiovascular System of the Healthy Domestic Sheep (

Hiu-Gwen Tsang, Emily L Clark, Greg R Markby, Stephen J Bush, David A Hume, Brendan M Corcoran, Vicky E MacRae, Kim M Summers

Open access · goldAbstract read
In one paragraph

Article in Frontiers in genetics, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
1.5field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 13 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 3 institutions in 2 countries.

Hiu-Gwen TsangThe Roslin Institute and R(D)SVS, The University of Edinburgh, Edinburgh, United Kingdom.
Emily L ClarkThe Roslin Institute and R(D)SVS, The University of Edinburgh, Edinburgh, United Kingdom.
Greg R MarkbyThe Roslin Institute and R(D)SVS, The University of Edinburgh, Edinburgh, United Kingdom.
Stephen J BushThe Roslin Institute and R(D)SVS, The University of Edinburgh, Edinburgh, United Kingdom.
David A HumeMater Research Institute-University of Queensland, Translational Research Institute, Woolloongabba, QLD, Australia.
Brendan M CorcoranThe Royal (Dick) School of Veterinary Studies, The University of Edinburgh, Edinburgh, United Kingdom.
Vicky E MacRaeThe Roslin Institute and R(D)SVS, The University of Edinburgh, Edinburgh, United Kingdom.
Kim M SummersThe Roslin Institute and R(D)SVS, The University of Edinburgh, Edinburgh, United Kingdom.
Roslin Institute · GBMater Research · AUUniversity of Edinburgh · GB

Funding

Biotechnology and Biological Sciences Research Council BB/L001209/1Biotechnology and Biological Sciences Research Council BBS/E/D/20211552Medical Research Council MR/K001744/1
6 · The paper itself

Abstract

The maintenance of a healthy cardiovascular system requires expression of genes that contribute to essential biological activities and repression of those that are associated with functions likely to be detrimental to cardiovascular homeostasis. Vascular calcification is a major disruption to cardiovascular homeostasis, where tissues of the cardiovascular system undergo ectopic calcification and consequent dysfunction, but little is known about the expression of calcification genes in the healthy cardiovascular system. Large animal models are of increasing importance in cardiovascular disease research as they demonstrate more similar cardiovascular features (in terms of anatomy, physiology and size) to humans than do rodent species. We used RNA sequencing results from the sheep, which has been utilized extensively to examine calcification of prosthetic cardiac valves, to explore the transcriptome of the heart and cardiac valves in this large animal, in particular looking at expression of calcification and extracellular matrix genes. We then examined genes implicated in the process of vascular calcification in a wide array of cardiovascular tissues and across multiple developmental stages, using RT-qPCR. Our results demonstrate that there is a balance between genes that promote and those that suppress mineralization during development and across cardiovascular tissues. We show extensive expression of genes encoding proteins involved in formation and maintenance of the extracellular matrix in cardiovascular tissues, and high expression of hematopoietic genes in the cardiac valves. Our analysis will support future research into the functions of implicated genes in the development of valve calcification, and increase the utility of the sheep as a large animal model for understanding ectopic calcification in cardiovascular disease. This study provides a foundation to explore the transcriptome of the developing cardiovascular system and is a valuable resource for the fields of mammalian genomics and cardiovascular research.

Indexed as

cardiovascular systemectopic calcificationextra cellular matrixgene expressionnetwork analysisRNA-seqsheep

Identifiers

PMID33101359
PMCPMC7506100
OpenAlexW3084176619

What OpenQuestion holds

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LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.