Evidence map›Paper›PMID 33101353›Full record

ArticleFrontiers in genetics2020

Haplotype Block Analysis Reveals Candidate Genes and QTLs for Meat Quality and Disease Resistance in Chinese Jiangquhai Pig Breed.

Favour Oluwapelumi Oyelami, Qingbo Zhao, Zhong Xu, Zhe Zhang, Hao Sun, Zhenyang Zhang, Peipei Ma, Qishan Wang, Yuchun Pan

Open access · goldAbstract read
In one paragraph

Article in Frontiers in genetics, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers, 2 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed, 2 pooled it
0.9field-weighted citation impact, top 23% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 2 syntheses or guidelines pooled it, 21 citations in OpenAlex.

  1. Pooled it
  2. Pooled it
  3. Article
  4. SNP-Based and Kmer-Based eQTL Analysis Using Transcriptome Data.Animals : an open access journal from MDPI · 2024
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 2 institutions in 1 country.

Favour Oluwapelumi OyelamiDepartment of Animal Science, School of Agriculture and Biology, Shanghai Jiao Tong University, Shanghai, China.
Qingbo ZhaoDepartment of Animal Science, School of Agriculture and Biology, Shanghai Jiao Tong University, Shanghai, China.
Zhong XuDepartment of Animal Science, School of Agriculture and Biology, Shanghai Jiao Tong University, Shanghai, China.
Zhe ZhangDepartment of Animal Breeding and Reproduction, College of Animal Science, Zhejiang University, Hangzhou, China.
Hao SunDepartment of Animal Science, School of Agriculture and Biology, Shanghai Jiao Tong University, Shanghai, China.
Zhenyang ZhangDepartment of Animal Science, School of Agriculture and Biology, Shanghai Jiao Tong University, Shanghai, China.
Peipei MaDepartment of Animal Science, School of Agriculture and Biology, Shanghai Jiao Tong University, Shanghai, China.
Qishan WangDepartment of Animal Science, School of Agriculture and Biology, Shanghai Jiao Tong University, Shanghai, China.
Yuchun PanDepartment of Animal Science, School of Agriculture and Biology, Shanghai Jiao Tong University, Shanghai, China.
Shanghai Jiao Tong University · CNZhejiang University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The Jiangquhai (JQ) pig breed is one of the most widely recognized pig populations in China due to its unique and dominant characteristics. In this study, we examined the extent of Linkage disequilibrium (LD) and haplotype block structure of the JQ pig breed, and scanned the blocks for possible genes underlying important QTLs that could either be responsible for some adaptive features in these pigs or might have undergone some selection pressure. We compared some of our results with other Chinese and Western pig breeds. The results show that the JQ breed had the highest total block length (349.73 Mb ≈ 15% of its genome), and the coverage rate of blocks in most of its chromosomes was larger than those of other breeds except for

Indexed as

Chinese pigscomplex traitsconservationhaplotypeslinkage disequilibrium

Identifiers

PMID33101353
PMCPMC7498712
OpenAlexW3037894801

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.