Evidence map›Paper›PMID 33099693›Full record

ArticleArchives of virology2021

Isolation and complete genome sequencing of the virulent phage vB_EcoS_XY3 infecting multidrug-resistant Escherichia coli.

Pan Fu, Qiang Zhao, Li Shi, Qin Xiong, Hongxia Xu, Senmao Cai, Qianqian Xu, Xiaodong Sun, Ming Sang

Abstract read
PubMed Publisher
In one paragraph

Article in Archives of virology, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Review
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Pan FuHubei Clinical Research Center of Parkinson's Disease, Hubei Key Laboratory of Wudang Local Chinese Medicine Research, Xiangyang No.1 People's Hospital, Hubei University of Medicine, Shiyan, 442000, China.
Qiang ZhaoHubei Clinical Research Center of Parkinson's Disease, Hubei Key Laboratory of Wudang Local Chinese Medicine Research, Xiangyang No.1 People's Hospital, Hubei University of Medicine, Shiyan, 442000, China.
Li ShiDepartment of Clinical Laboratory, Xiangyang No. 1 People's Hospital, Hubei University of Medicine, Xiangyang, 441000, China.
Qin XiongDepartment of Clinical Laboratory, Xiangyang No. 1 People's Hospital, Hubei University of Medicine, Xiangyang, 441000, China.
Hongxia XuHubei Clinical Research Center of Parkinson's Disease, Hubei Key Laboratory of Wudang Local Chinese Medicine Research, Xiangyang No.1 People's Hospital, Hubei University of Medicine, Shiyan, 442000, China.
Senmao CaiHubei Clinical Research Center of Parkinson's Disease, Hubei Key Laboratory of Wudang Local Chinese Medicine Research, Xiangyang No.1 People's Hospital, Hubei University of Medicine, Shiyan, 442000, China.
Qianqian XuHubei Clinical Research Center of Parkinson's Disease, Hubei Key Laboratory of Wudang Local Chinese Medicine Research, Xiangyang No.1 People's Hospital, Hubei University of Medicine, Shiyan, 442000, China.
Xiaodong SunHubei Clinical Research Center of Parkinson's Disease, Hubei Key Laboratory of Wudang Local Chinese Medicine Research, Xiangyang No.1 People's Hospital, Hubei University of Medicine, Shiyan, 442000, China.
Ming SangHubei Clinical Research Center of Parkinson's Disease, Hubei Key Laboratory of Wudang Local Chinese Medicine Research, Xiangyang No.1 People's Hospital, Hubei University of Medicine, Shiyan, 442000, China. smxd2000@126.com.ORCID http://orcid.org/0000-0003-2322-0674

Funding

Innovative Team Project from the Institute of Medicine and Nursing at Hubei University of Medicine 2017YHKT02Natural Science Foundation of Hubei Province of China 2018CFB701Natural Science Foundation of Hubei Province of China 2019AHB068Natural Science Foundation of Hubei Province of China 2020DFE025Scientific Research Project of Hubei Province Health Committee ZY2019F028
6 · The paper itself

Abstract

A virulent phage, named vB_EcoS_XY3, was isolated from hospital wastewater in Xiangyang, China. Its morphological characteristics, growth parameters, adsorption rate, and pH and temperature stability were determined. Phage vB_EcoS_XY3 was found to be able to infect Escherichia coli laboratory strains and also some multidrug-resistant E. coli strains. Its complete genome consists of 51,345 base pairs of double-stranded DNA with an average GC content of 55.24% and 85 putative protein-coding genes. Forty-four genes were annotated with known functions. These results will not only provide further insights into E. coli phages but also have implications for the development of potential biocontrol agents.

Indexed as

BacteriophagesBase CompositionChinaDNADNA, ViralDrug Resistance, Multiple, BacterialEscherichia coliGenome, ViralSequence Analysis, DNAVirulenceWastewaterWhole Genome SequencingDNADNA, ViralWastewater

Identifiers

PMID33099693

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.