Evidence map›Paper›PMID 33098688›Full record

ArticleFEBS letters2021

A missense mutation in a patient with developmental delay affects the activity and structure of the hexosamine biosynthetic pathway enzyme AGX1.

Xiping Chen, Olawale G Raimi, Andrew T Ferenbach, Daan M F van Aalten

Open access · hybridAbstract read
In one paragraph

Article in FEBS letters, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
0.3field-weighted citation impact, top 45% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 4 citations in OpenAlex.

  1. Review
  2. Review
  3. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Xiping ChenDivision of Gene Regulation and Expression, School of Life Sciences, University of Dundee, Dundee, UK.
Olawale G RaimiDivision of Gene Regulation and Expression, School of Life Sciences, University of Dundee, Dundee, UK.
Andrew T FerenbachDivision of Gene Regulation and Expression, School of Life Sciences, University of Dundee, Dundee, UK.
Daan M F van AaltenDivision of Gene Regulation and Expression, School of Life Sciences, University of Dundee, Dundee, UK.ORCID 0000-0002-1499-6908
University of Dundee · GB

Funding

Wellcome Trust 110061
6 · The paper itself

Abstract

O-GlcNAcylation is a post-translational modification catalysed by O-GlcNAc transferase (OGT). Missense mutations in OGT have been associated with developmental disorders, OGT-linked congenital disorder of glycosylation (OGT-CDG), which are characterized by intellectual disability. OGT relies on the hexosamine biosynthetic pathway (HBP) for provision of its UDP-GlcNAc donor. We considered whether mutations in UDP-N-acetylhexosamine pyrophosphorylase (UAP1), which catalyses the final step in the HBP, would phenocopy OGT-CDG mutations. A de novo mutation in UAP1 (NM_001324114:c.G685A:p.A229T) was reported in a patient with intellectual disability. We show that this mutation is pathogenic and decreases the stability and activity of the UAP1 isoform AGX1 in vitro. X-ray crystallography reveals a structural shift proximal to the mutation, leading to a conformational change of the N-terminal domain. These data suggest that the UAP1

Indexed as

Mutation, MissenseAmino Acid SequenceAnimalsCrystallography, X-RayDevelopmental DisabilitiesEnzyme StabilityGalactosyltransferasesHexosaminesHumansProtein Processing, Post-TranslationalSequence Homology, Amino AcidGalactosyltransferasesHexosaminesUDP-GalNAc pyrophosphorylase AGX1, humanenzyme mutationneurodevelopmentO-GlcNAcylationpathogenesisprotein structure

Identifiers

PMID33098688
PMCPMC7839538
OpenAlexW3094285172

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.