Evidence map›Paper›PMID 33098683›Full record

ArticleHistopathology2021

RNF43 mutation analysis in serrated polyposis, sporadic serrated polyps and Lynch syndrome polyps.

Yasmijn J van Herwaarden, Lieke M Koggel, Femke Simmer, Elisa M Vink-Börger, Polat Dura, Gerrit A Meijer, Fokko M Nagengast, Nicoline Hoogerbrugge, Tanya M Bisseling, Iris D Nagtegaal

Open access · hybridAbstract read
In one paragraph

Article in Histopathology, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
1.3field-weighted citation impact, top 20% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 16 citations in OpenAlex.

  1. Article
  2. Review
  3. Review
  4. Article
  5. Review
  6. The role of SWI/SNF complexes in digestive system neoplasms.Medical oncology (Northwood, London, England) · 2024
    Review
  7. Article
  8. Article
  9. Article
  10. The emerging era of personalized medicine in advanced colorectal cancer.Journal of gastroenterology and hepatology · 2022
    Review
  11. How many is too many? Polyposis syndromes and what to do next.Current opinion in gastroenterology · 2022
    Review
  12. Review
  13. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 2 institutions in 1 country.

Yasmijn J van HerwaardenDepartments of Gastroenterology and Hepatology, Radboud University Medical Center, Nijmegen, the Netherlands.ORCID https://orcid.org/0000-0001-5623-7750
Lieke M KoggelDepartments of Gastroenterology and Hepatology, Radboud University Medical Center, Nijmegen, the Netherlands.ORCID https://orcid.org/0000-0001-9826-0676
Femke SimmerDepartment of Pathology, Radboud University Medical Center, Nijmegen, the Netherlands.ORCID https://orcid.org/0000-0002-3020-1896
Elisa M Vink-BörgerDepartment of Pathology, Radboud University Medical Center, Nijmegen, the Netherlands.
Polat DuraDepartments of Gastroenterology and Hepatology, Radboud University Medical Center, Nijmegen, the Netherlands.
Gerrit A MeijerDepartment of Pathology, Netherlands Cancer Institute (Antoni van Leeuwenhoek), Amsterdam, the Netherlands.ORCID https://orcid.org/0000-0003-0330-3130
Fokko M NagengastDepartments of Gastroenterology and Hepatology, Radboud University Medical Center, Nijmegen, the Netherlands.ORCID https://orcid.org/0000-0001-6834-9880
Nicoline HoogerbruggeDepartment of Human Genetics, Radboud University Medical Center, Nijmegen, the Netherlands.ORCID https://orcid.org/0000-0003-2393-8141
Tanya M BisselingDepartments of Gastroenterology and Hepatology, Radboud University Medical Center, Nijmegen, the Netherlands.ORCID https://orcid.org/0000-0001-7976-7949
Iris D NagtegaalDepartment of Pathology, Radboud University Medical Center, Nijmegen, the Netherlands.ORCID https://orcid.org/0000-0003-0887-4127
Radboud University Nijmegen · NLThe Netherlands Cancer Institute · NL

Funding

Nederlandse Organisatie voor Wetenschappelijk Onderzoek 017-009-074
6 · The paper itself

Abstract

aimsRNF43 is suggested to be involved in the serrated pathway towards colorectal cancer and encodes a transmembrane Ring-type E3 ubiquitin ligase that negatively regulates the Wnt pathway. This study aimed to elucidate the role of RNF43 gene variants in serrated polyposis syndrome (SPS) and serrated polyps. METHODS AND

resultsThree cohorts were tested. The first cohort included germline DNA of 26 SPS patients tested for pathogenic variants in RNF43 by Sanger sequencing all exons. In the second cohort we tested somatic DNA for RNF43 mutations from sporadic serrated lesions: 25 hyperplastic polyps, 35 sessile serrated lesions and 38 traditional serrated adenomas (TSA). In the third cohort we investigated RNF43 mutations in 49 serrated polyps and 60 conventional adenomas from 40 patients with Lynch syndrome. No germline RNF43 pathogenic variants were detected in our SPS cohort. In sporadic colorectal lesions we detected RNF43 deleterious frameshift mutations in three TSA and one SSL. The RNF43 mutations in previously described homopolymeric hot-spots were detected in microsatellite-instable (MSI) polyps and the other RNF43 mutations in microsatellite-stable (MSS) serrated polyps. RNF43 hot-spot mutations were discovered in seven serrated polyps and 12 conventional adenomas from Lynch patients.

conclusionTruncating germline RNF43 mutations are uncommon in SPS patients. Somatic mutations in RNF43 were found in sporadic TSA and SSL and both serrated polyps and adenomas from Lynch syndrome patients, suggesting that they do not develop early in the pathway to CRC and are not specific for serrated polyp subtypes.

Indexed as

Colonic NeoplasmsColonic PolypsColorectal Neoplasms, Hereditary NonpolyposisUbiquitin-Protein LigasesAdultAgedCohort StudiesColonColorectal NeoplasmsDiagnosis, DifferentialDNA Mutational AnalysisFemaleHumansMaleMicrosatellite InstabilityMiddle AgedRNF43 protein, humanUbiquitin-Protein LigasesRNF43serrated polyposis syndromeserrated polypssomatic mutation

Identifiers

PMID33098683
PMCPMC8048817
OpenAlexW3093476763

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.