Evidence map›Paper›PMID 33098552›Full record

ArticleMolecular biology reports2020

Discovery of genomic regions and candidate genes for grain weight employing next generation sequencing based QTL-seq approach in rice (Oryza sativa L.).

Reddyyamini Bommisetty, Navajeet Chakravartty, Reddaiah Bodanapu, Jeevula B Naik, Sanjib K Panda, Sivarama P Lekkala, Krishna Lalam, George Thomas, S J Mallikarjuna, G R Eswar and 11 more

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Article in Molecular biology reports, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
1.8field-weighted citation impact, top 14% of its field
1 · What the graph read from it

What it found

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2 · The registry

The trial behind it

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3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 16 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

21 authors at 3 institutions in 1 country.

Reddyyamini Bommisetty *Department of Genetics and Plant Breeding, S.V Agricultural College, Acharya NG Ranga Agricultural University (ANGRAU), Tirupati, 517502, India.ORCID http://orcid.org/0000-0001-8815-7456
Navajeet Chakravartty *AgriGenome Labs Pvt Ltd., SINC, IKP Knowledge Park, Genome Valley, Hyderabad, India.
Reddaiah BodanapuAgriGenome Labs Pvt Ltd., SINC, IKP Knowledge Park, Genome Valley, Hyderabad, India.ORCID http://orcid.org/0000-0002-0176-5027
Jeevula B NaikRegional Agricultural Research Station, ANGRAU, Tirupati, 517502, India.ORCID http://orcid.org/0000-0001-9618-4534
Sanjib K PandaCentral University of Rajasthan, Ajmer, Rajasthan, India.
Sivarama P LekkalaAgriGenome Labs Pvt Ltd., SINC, IKP Knowledge Park, Genome Valley, Hyderabad, India.ORCID http://orcid.org/0000-0002-4973-0659
Krishna LalamAgriGenome Labs Pvt Ltd., SINC, IKP Knowledge Park, Genome Valley, Hyderabad, India.ORCID http://orcid.org/0000-0003-4561-2345
George ThomasAgriGenome Labs Pvt Ltd., SINC, IKP Knowledge Park, Genome Valley, Hyderabad, India.
S J MallikarjunaDepartment of Genetics and Plant Breeding, S.V Agricultural College, Acharya NG Ranga Agricultural University (ANGRAU), Tirupati, 517502, India.ORCID http://orcid.org/0000-0002-8568-6480
G R EswarDepartment of Genetics and Plant Breeding, S.V Agricultural College, Acharya NG Ranga Agricultural University (ANGRAU), Tirupati, 517502, India.ORCID http://orcid.org/0000-0002-1781-4663
Gopalakrishna M KadambariDepartment of Genetics and Plant Breeding, S.V Agricultural College, Acharya NG Ranga Agricultural University (ANGRAU), Tirupati, 517502, India.ORCID http://orcid.org/0000-0002-3305-2283
Swarajyalakshmi N BollineniRegional Agricultural Research Station, ANGRAU, Tirupati, 517502, India.ORCID http://orcid.org/0000-0002-2096-5358
Keerthi IssaRegional Agricultural Research Station, ANGRAU, Tirupati, 517502, India.ORCID http://orcid.org/0000-0003-2645-461X
Srividhya AkkareddyRegional Agricultural Research Station, ANGRAU, Tirupati, 517502, India.ORCID http://orcid.org/0000-0002-3713-2598
C SrilakshmiAgricultural Research Station, ANGRAU, Nellore, India.ORCID http://orcid.org/0000-0002-9916-0607
K HariprasadreddyDepartment of Genetics and Plant Breeding, S.V Agricultural College, Acharya NG Ranga Agricultural University (ANGRAU), Tirupati, 517502, India.ORCID http://orcid.org/0000-0002-4460-3976
P RameshbabuDepartment of Genetics and Plant Breeding, S.V Agricultural College, Acharya NG Ranga Agricultural University (ANGRAU), Tirupati, 517502, India.ORCID http://orcid.org/0000-0003-0384-9483
P SudhakarDepartment of Crop Physiology, S.V Agricultural College, ANGRAU, Tirupati, 517502, India.ORCID http://orcid.org/0000-0003-3892-8149
Saurabh GuptaAgriGenome Labs Pvt Ltd., SINC, IKP Knowledge Park, Genome Valley, Hyderabad, India.ORCID http://orcid.org/0000-0002-1327-7389
V B R LachagariAgriGenome Labs Pvt Ltd., SINC, IKP Knowledge Park, Genome Valley, Hyderabad, India. vb.reddy@aggenome.com.ORCID http://orcid.org/0000-0002-4708-7866
Lakshminarayana R VemireddyDepartment of Genetics and Plant Breeding, S.V Agricultural College, Acharya NG Ranga Agricultural University (ANGRAU), Tirupati, 517502, India. drvlnreddy@gmail.com.ORCID http://orcid.org/0000-0002-9452-8492
Acharya N. G. Ranga Agricultural University · INSciGenom Labs (India) · INCentral University of Rajasthan · IN

Funding

Department of Biotechnology DBT-NER/AGRI/29/2015(GROUP- 4) dated 19/10/2016
6 · The paper itself

Abstract

Rice (Oryza sativa L.) yield enhancement is one of the prime objectives of plant breeders. Elucidation of the inheritance of grain weight, a key yield component trait, is of paramount importance for raising the yield thresholds in rice. In the present investigation, we employed Next-Generation Sequencing based QTL-seq approach to identify major genomic regions associated with grain weight using mapping populations derived from a cross between BPT5204 and MTU3626. QTL-seq analysis identified three grain weight quantitative trait loci (QTL) viz., qGW1 (35-40 Mb), qGW7 (10-18 Mb), and qGW8 (2-5 Mb) on chromosomes 1, 7 and 8, respectively and all are found to be novel. Further, qGW8 was confirmed through conventional QTL mapping in F

Indexed as

Chromosome MappingGenes, PlantPlant BreedingQuantitative Trait LociChromosomes, PlantDNA, PlantOryzaPolymorphism, Single NucleotideDNA, PlantGrain weightINDELsMappingNext-generation sequencingQTL-seqRice∆SNP-IndexSNPs

Identifiers

PMID33098552
OpenAlexW3094250940

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.