Evidence map›Paper›PMID 33098438›Full record

ArticleMicrobial ecology2021

Phylogeography and Symbiotic Effectiveness of Rhizobia Nodulating Chickpea (Cicer arietinum L.) in Ethiopia.

A H Gunnabo, J van Heerwaarden, R Geurts, E Wolde-Meskel, T Degefu, K E Giller

Abstract read
In one paragraph

Article in Microbial ecology, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

  1. Article
  2. Article
  3. Population and genetic diversity of rhizobia nodulating chickpea in Indo-Gangetic plains of India.Brazilian journal of microbiology : [publication of the Brazilian Society for Microbiology] · 2024
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

A H GunnaboPlant Production Systems Group, Wageningen University and Research, Wageningen, The Netherlands. ashenafigunabo@gmail.com.ORCID http://orcid.org/0000-0003-4559-7130
J van HeerwaardenPlant Production Systems Group, Wageningen University and Research, Wageningen, The Netherlands. joost.vanheerwaarden@wur.nl.
R GeurtsLaboratory of Molecular Biology, Department of Plant Science, Wageningen University, Wageningen, The Netherlands.
E Wolde-MeskelWorld Agroforestry Centre (ICRAF), Addis Ababa, Ethiopia.
T DegefuInternational Crops Research Institute for the Semi-Arid Tropics, Addis Ababa, Ethiopia.
K E GillerPlant Production Systems Group, Wageningen University and Research, Wageningen, The Netherlands.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Chickpea (Cicer arietinum L.) used to be considered a restrictive host that nodulated and fixed nitrogen only with Mesorhizobium ciceri and M. mediterraneum. Recent analysis revealed that chickpea can also establish effective symbioses with strains of several other Mesorhizobium species such as M. loti, M. haukuii, M. amorphae, M. muleiense, etc. These strains vary in their nitrogen fixation potential inviting further exploration. We characterized newly collected mesorhizobial strains isolated from various locations in Ethiopia to evaluate genetic diversity, biogeographic structure and symbiotic effectiveness. Symbiotic effectiveness was evaluated in Leonard Jars using a locally released chickpea cultivar "Nattoli". Most of the new isolates belonged to a clade related to M. plurifarium, with very few sequence differences, while the total collection of strains contained three additional mesorhizobial genospecies associated with M. ciceri, M. abyssinicae and an unidentified Mesorhizobium species isolated from a wild host in Eritrea. The four genospecies identified represented a subset of the eight major Mesorhizobium clades recently reported for Ethiopia based on metagenomic data. All Ethiopian strains had nearly identical symbiotic genes that grouped them in a single cluster with M. ciceri, M. mediterraneum and M. muleiense, but not with M. plurifarium. Some phylogeographic structure was observed, with elevation and geography explaining some of the genetic differences among strains, but the relation between genetic identity and symbiotic effectiveness was observed to be weak.

Indexed as

CicerMesorhizobiumRhizobiumDNA, BacterialEthiopiaPhylogenyPhylogeographyRNA, Ribosomal, 16SSequence Analysis, DNASymbiosisDNA, BacterialRNA, Ribosomal, 16SGenetic diversityGenospeciesHaplotypesMesorhizobial strainsNucleotidesSpatial patterns

Identifiers

PMID33098438
PMCPMC7982387

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.