Evidence map›Paper›PMID 33096784›Full record

ArticleInternational journal of molecular sciences2020

High-Resolution Crystal Structure of Chloroplastic Ribose-5-Phosphate Isomerase from

Théo Le Moigne, Pierre Crozet, Stéphane D Lemaire, Julien Henri

Open access · goldAbstract read
In one paragraph

Article in International journal of molecular sciences, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
0.3field-weighted citation impact, top 42% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 7 citations in OpenAlex.

  1. Review
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Théo Le MoigneLaboratoire de Biologie Moléculaire et Cellulaire des Eucaryotes, UMR8226, Institut de Biologie Physico-Chimique, Sorbonne Université, CNRS, 75005 Paris, France.ORCID 0000-0003-2313-3052
Pierre CrozetLaboratoire de Biologie Moléculaire et Cellulaire des Eucaryotes, UMR8226, Institut de Biologie Physico-Chimique, Sorbonne Université, CNRS, 75005 Paris, France.
Stéphane D LemaireLaboratoire de Biologie Moléculaire et Cellulaire des Eucaryotes, UMR8226, Institut de Biologie Physico-Chimique, Sorbonne Université, CNRS, 75005 Paris, France.
Julien HenriLaboratoire de Biologie Moléculaire et Cellulaire des Eucaryotes, UMR8226, Institut de Biologie Physico-Chimique, Sorbonne Université, CNRS, 75005 Paris, France.ORCID 0000-0003-0772-8881
Centre National de la Recherche Scientifique · FR

Funding

Agence Nationale de la Recherche 11-LABX-0011Agence Nationale de la Recherche 19-CE11-0009-01
6 · The paper itself

Abstract

The Calvin-Benson cycle is the key metabolic pathway of photosynthesis responsible for carbon fixation and relies on eleven conserved enzymes. Ribose-5-phosphate isomerase (RPI) isomerizes ribose-5-phosphate into ribulose-5-phosphate and contributes to the regeneration of the Rubisco substrate. Plant RPI is the target of diverse post-translational modifications including phosphorylation and thiol-based modifications to presumably adjust its activity to the photosynthetic electron flow. Here, we describe the first experimental structure of a photosynthetic RPI at 1.4 Å resolution. Our structure confirms the composition of the catalytic pocket of the enzyme. We describe the homo-dimeric state of the protein that we observed in the crystal and in solution. We also map the positions of previously reported post-translational modifications and propose mechanisms by which they may impact the catalytic parameters. The structural data will inform the biochemical modeling of photosynthesis.

Indexed as

Aldose-Ketose IsomerasesCatalytic DomainChlamydomonas reinhardtiiChloroplast ProteinsCrystallography, X-RayModels, MolecularPhotosynthesisProtein MultimerizationProtein Processing, Post-TranslationalScattering, Small AngleX-Ray DiffractionAldose-Ketose IsomerasesChloroplast Proteinsribosephosphate isomeraseCalvin–Benson cyclechloroplastoligomerizationphotosynthesispost-translational modificationprotein complexesprotein structureredoxribose isomeraseX-ray crystallography

Identifiers

PMID33096784
PMCPMC7589169
OpenAlexW3094600591

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.