Evidence map›Paper›PMID 33096078›Full record

ReviewBiophysical journal2020

Structural Dynamics of Glutamate Signaling Systems by smFRET.

Ryan J Durham, Danielle R Latham, Hugo Sanabria, Vasanthi Jayaraman

Open access · bronzeAbstract readReview
In one paragraph

Review in Biophysical journal, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
0.5field-weighted citation impact, top 41% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 17 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
  4. Allosteric competition and inhibition in AMPA receptors.Nature structural & molecular biology · 2024
    Article
  5. Article
  6. Article
  7. Single-Molecule FRET Analyses of NMDA Receptors.Methods in molecular biology (Clifton, N.J.) · 2024
    Article
  8. Allosteric Competition and Inhibition in AMPA Receptors.bioRxiv : the preprint server for biology · 2023
    Article
  9. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 1 country.

Ryan J DurhamUniversity of Texas Health Science Center at Houston, Houston, Texas.
Danielle R LathamClemson University, Clemson, South Carolina.
Hugo SanabriaClemson University, Clemson, South Carolina. Electronic address: hsanabr@clemson.edu.
Vasanthi JayaramanUniversity of Texas Health Science Center at Houston, Houston, Texas. Electronic address: vasanthi.jayaraman@uth.tmc.edu.
Clemson University · USThe University of Texas Health Science Center at Houston · US

Funding

Tissue Structural and Neural Remodeling in Human Sacroiliac JointP20GM121342 · NIGMS · CLEMSON UNIVERSITY · PI Shangping Wang · 2018 to 2026
$24.7M
Dynamics Of Ligand Gated Ion ChannelsR35GM122528 · NIGMS · UNIVERSITY OF TEXAS HLTH SCI CTR HOUSTON · PI Vasanthi Jayaraman · 2017 to 2026
$6.2M
Agonist induced conformational changes in the NMDA receptorF31GM130035 · NIGMS · UNIVERSITY OF TEXAS HLTH SCI CTR HOUSTON · PI DURHAM, RYAN JAMES · 2018 to 2020
$96k
NIGMS NIH HHS F31 GM130035NIGMS NIH HHS P20 GM121342NIGMS NIH HHS R35 GM122528
6 · The paper itself

Abstract

Single-molecule Förster resonance energy transfer (smFRET) is a powerful technique for investigating the structural dynamics of biological macromolecules. smFRET reveals the conformational landscape and dynamic changes of proteins by building on the static structures found using cryo-electron microscopy, x-ray crystallography, and other methods. Combining smFRET with static structures allows for a direct correlation between dynamic conformation and function. Here, we discuss the different experimental setups, fluorescence detection schemes, and data analysis strategies that enable the study of structural dynamics of glutamate signaling across various timescales. We illustrate the versatility of smFRET by highlighting studies of a wide range of questions, including the mechanism of activation and transport, the role of intrinsically disordered segments, and allostery and cooperativity between subunits in biological systems responsible for glutamate signaling.

Indexed as

Fluorescence Resonance Energy TransferProteinsCryoelectron MicroscopyGlutamatesMolecular ConformationGlutamatesProteins

Identifiers

PMID33096078
PMCPMC7732771
OpenAlexW3093868780

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.