ArticlePlant biotechnology journal2021
Microbiome-wide association studies reveal correlations between the structure and metabolism of the rhizosphere microbiome and disease resistance in cassava.
Article in Plant biotechnology journal, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 21 papers.
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Who cites it
21 citing papers in PubMed, 51 citations in OpenAlex.
- Probiotics in colorectal cancer: mechanisms, biomarkers, and adjunct strategies.Cancer biology & medicine · 2026Review
- The Effect of Indigenous Cultivable Microorganism Inoculation on Soil Microecology During Restoration of Obstructed Soils.Microorganisms · 2026Article
- Plant viruses and the microbiome: a complex network shaping plant health and disease resistance.Archives of virology · 2026Review
- Integrated metabarcoding and culturomics reveal the rot-suppressive rhizoplane mycobiome of cassava across contrasting agroecological habitats.Frontiers in plant science · 2026Article
- Integrating microbiome and machine learning for precision diagnosis of rice bakanae disease.Plant methods · 2025Article
- Streptomyces gilvus sp. nov., Actinomycete Isolated from Cassava (Manihot esculenta Crantz) Rhizosphere Soil.Current microbiology · 2025Article
- Article
- Integrated physiological, microbial, and metabolomics analyses revealed the differences in different varieties ofFrontiers in plant science · 2025Article
- The role of the rhizobiome recruited by root exudates in plant disease resistance: current status and future directions.Environmental microbiome · 2024Review
- KIN10-mediated HB16 protein phosphorylation and self-association improve cassava disease resistance by transcriptional activation of lignin biosynthesis genes.Plant biotechnology journal · 2024Article
- Unraveling plant-microbe interactions: can integrated omics approaches offer concrete answers?Journal of experimental botany · 2024Article
- Characterization of the Cassava Mycobiome in Symptomatic Leaf Tissues Displaying Cassava Superelongation Disease.Journal of fungi (Basel, Switzerland) · 2023Article
- Artificial Intelligence: A Promising Tool in Exploring the Phytomicrobiome in Managing Disease and Promoting Plant Health.Plants (Basel, Switzerland) · 2023Review
- Exploring the Frequency and Distribution of Ecological Non-monotonicity in Associations among Ecosystem Constituents.Ecosystems (New York, N.Y.) · 2023Article
- Pseudo high-frequency boosts the generalization of a convolutional neural network for cassava disease detection.Plant methods · 2022Article
- Host genetic determinants drive compartment-specific assembly of tea plant microbiomes.Plant biotechnology journal · 2022Article
- Integration of multi-omics technologies for crop improvement: Status and prospects.Frontiers in bioinformatics · 2022Article
- Distinct rhizosphere soil responses to nitrogen in relation to microbial biomass and community composition at initial flowering stages of alfalfa cultivars.Frontiers in plant science · 2022Article
- Microbiome-wide association studies reveal correlations between the structure and metabolism of the rhizosphere microbiome and disease resistance in cassava.Plant biotechnology journal · 2021Article
- Application of Deep Learning in Plant-Microbiota Association Analysis.Frontiers in genetics · 2021Review
Corrections and comments
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Authors and funding
7 authors at 2 institutions in 1 country.
Funding
No grant is acknowledged in the PubMed record.
Abstract
Cassava is one of the most important staple food crops in tropical regions. To date, an understanding of the relationship between microbial communities and disease resistance in cassava has remained elusive. In order to explore the relationship among microbiome and phenotypes for further targeted design of microbial community, 16S rRNA and ITS of microbiome of ten cassava varieties were analysed, and a distinctive microbial community in the rhizosphere showed significant interdependence with disease resistance. Shotgun metagenome sequencing was performed to elucidate the structure of microbiomes of cassava rhizosphere. Comprehensive microbiome studies were performed to assess the correlation between the rhizosphere microbiome and disease resistance. Subsequently, the metagenome of rhizosphere microbiome was annotated to obtain taxonomic information at species level and identify metabolic pathways that were significantly associated with cassava disease resistance. Notably, cassava disease resistance was significantly associated with Lactococcus sp., which specifically produces nisin. To definitively explain the role of nisin and underlying mechanism, analysis of nisin biosynthesis-associated genes together with in vitro and in vivo experiments highlighted the effect of nisin on inhibiting the growth of Xanthomonas axonopodis pv. manihotis (Xam) and activating immune response in cassava. The new insights between cassava rhizosphere microbiome especially Lactococcus sp. and disease resistance provide valuable information into further control of cassava disease.
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