Evidence map›Paper›PMID 33095297›Full record

ArticleBulletin of mathematical biology2020

Dynamics of Vesicles Driven Into Closed Constrictions by Molecular Motors.

Youngmin Park, Thomas G Fai

Open access · greenAbstract read
In one paragraph

Article in Bulletin of mathematical biology, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
0.2field-weighted citation impact, top 51% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 2 citations in OpenAlex.

  1. Article
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors at 1 institution in 1 country.

Youngmin ParkDepartment of Mathematics, Brandeis University, Waltham, MA, 02453, USA. ypark@brandeis.edu.ORCID 0000-0003-1778-2160
Thomas G FaiDepartment of Mathematics, Brandeis University, Waltham, MA, 02453, USA.ORCID 0000-0003-0383-5217
Brandeis University · US

Funding

Quantitative Neuroscience: Tools for Bridging Levels of AnalysisT32NS007292 · NINDS · BRANDEIS UNIVERSITY · PI GINA G TURRIGIANO · 1986 to 2026
$12.7M
National Science Foundation DMS-1913093NIH HHS T32 NS007292NINDS NIH HHS T32 NS007292
6 · The paper itself

Abstract

We study the dynamics of a model of membrane vesicle transport into dendritic spines, which are bulbous intracellular compartments in neurons driven by molecular motors. We reduce the lubrication model proposed in Fai et al. (Phys Rev Fluids 2:113601, 2017) to a fast-slow system, yielding an analytically and numerically tractable equation equivalent to the original model in the overdamped limit. The model's key parameters include: (1) the ratio of motors that prefer to push toward the head of the dendritic spine to the motors that prefer to push in the opposite direction, and (2) the viscous drag exerted on the vesicle by the spine constriction. We perform a numerical bifurcation analysis in these parameters and find that steady-state vesicle velocities appear and disappear through several saddle-node bifurcations. This process allows us to identify the region of parameter space in which multiple stable velocities exist. We show by direct calculations that there can only be unidirectional motion for sufficiently close vesicle-to-spine diameter ratios. Our analysis predicts the critical vesicle-to-spine diameter ratio, at which there is a transition from unidirectional to bidirectional motion, consistent with experimental observations of vesicle trajectories in the literature.

Indexed as

Models, BiologicalTransport VesiclesBiological TransportConstrictionMathematical ConceptsMotionViscosityCell physiologyDendritic spinesMotor transportNeurophysiologyVesicle transport

Identifiers

PMID33095297
PMCPMC8646266
OpenAlexW3015637965

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.