Evidence map›Paper›PMID 33093602›Full record

ArticleScientific reports2020

CUX2, BRAP and ALDH2 are associated with metabolic traits in people with excessive alcohol consumption.

I-Chun Chen, Po-Hsiu Kuo, Albert C Yang, Shih-Jen Tsai, Tung-Hsia Liu, Hung-Jen Liu, Tsuo-Hung Lan, Hong-Ming Chen, Huang-Nan Huang, Ren-Hua Chung and 1 more

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed, 1 pooled it
1.4field-weighted citation impact, top 18% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 1 synthesis or guideline pooled it, 13 citations in OpenAlex.

  1. Genome-wide meta-analysis of alcohol use disorder in East Asians.Neuropsychopharmacology : official publication of the American College of Neuropsychopharmacology · 2022
    Pooled it
  2. Article
  3. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 8 institutions in 2 countries.

I-Chun ChenDepartment of Psychiatry, Taichung Veterans General Hospital, Taichung City, Taiwan.
Po-Hsiu KuoInstitute of Epidemiology and Preventive Medicine, College of Public Health, National Taiwan University, Taipei, Taiwan.
Albert C YangDivision of Interdisciplinary Medicine and Biotechnology, Beth Israel Deaconess Medical Center, Harvard Medical School, Boston, MA, USA.
Shih-Jen TsaiInstitute of Brain Science, National Yang-Ming University, Taipei, Taiwan.
Tung-Hsia LiuCenter for Neuropsychiatric Research, National Health Research Institutes, 35 Keyan Road, Zhunan Town, Miaoli County, 35053, Taiwan.
Hung-Jen LiuRong Hsing Research Center For Translational Medicine, National Chung Hsing University, Taichung City, Taiwan. hjliu5257@nchu.edu.tw.
Tsuo-Hung LanDepartment of Psychiatry, Taichung Veterans General Hospital, Taichung City, Taiwan.
Hong-Ming ChenDepartment of Applied Mathematics, Tunghai University, Taichung City, Taiwan.
Huang-Nan HuangDepartment of Applied Mathematics, Tunghai University, Taichung City, Taiwan.
Ren-Hua ChungDivision of Biostatistics and Bioinformatics, Institute of Population Health Sciences, National Health Research Institutes, Taipei, Taiwan.
Yu-Li LiuCenter for Neuropsychiatric Research, National Health Research Institutes, 35 Keyan Road, Zhunan Town, Miaoli County, 35053, Taiwan. ylliou@nhri.org.tw.
National Health Research Institutes · TWTunghai University · TWBeth Israel Deaconess Medical Center · USNational Chung Hsing University · TWNational Taiwan University · TWNational Yang Ming Chiao Tung University · TWTaichung Veterans General Hospital · TWTaipei Veterans General Hospital · TW

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Molecular mechanisms that prompt or mitigate excessive alcohol consumption could be partly explained by metabolic shifts. This genome-wide association study aims to identify the susceptibility gene loci for excessive alcohol consumption by jointly measuring weekly alcohol consumption and γ-GT levels. We analysed the Taiwan Biobank data of 18,363 Taiwanese people, including 1945 with excessive alcohol use. We found that one or two copies of the G allele in rs671 (ALDH2) increased the risk of excessive alcohol consumption, while one or two copies of the C allele in rs3782886 (BRAP) reduced the risk of excessive alcohol consumption. To minimize the influence of extensive regional linkage disequilibrium, we used the ridge regression. The ridge coefficients of rs7398833, rs671 and rs3782886 were unchanged across different values of the shrinkage parameter. The three variants corresponded to posttranscriptional activity, including cut-like homeobox 2 (a protein coded by CUX2), Glu504Lys of acetaldehyde dehydrogenase 2 (a protein encoded by ALDH2) and Glu4Gly of BRCA1-associated protein (a protein encoded by BRAP). We found that Glu504Lys of ALDH2 and Glu4Gly of BRAP are involved in the negative regulation of excessive alcohol consumption. The mechanism underlying the γ-GT-catalytic metabolic reaction in excessive alcohol consumption is associated with ALDH2, BRAP and CUX2. Further study is needed to clarify the roles of ALDH2, BRAP and CUX2 in the liver-brain endocrine axis connecting metabolic shifts with excessive alcohol consumption.

Indexed as

Polymorphism, Single NucleotideQuantitative Trait LociAlcohol DrinkingAldehyde Dehydrogenase, MitochondrialCohort StudiesFemaleGene Expression RegulationGenetic Predisposition to DiseaseGenome-Wide Association StudyGenotypeHomeodomain ProteinsHumansMaleMiddle AgedUbiquitin-Protein LigasesAldehyde Dehydrogenase, MitochondrialALDH2 protein, humanBRAP protein, humanCUX2 protein, humanHomeodomain ProteinsUbiquitin-Protein Ligases

Identifiers

PMID33093602
PMCPMC7583246
OpenAlexW3093990967

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.