Evidence map›Paper›PMID 33093443›Full record

ArticleNature communications2020

MSH1-induced heritable enhanced growth vigor through grafting is associated with the RdDM pathway in plants.

Hardik Kundariya, Xiaodong Yang, Kyla Morton, Robersy Sanchez, Michael J Axtell, Samuel F Hutton, Michael Fromm, Sally A Mackenzie

Open access · goldAbstract read
In one paragraph

Article in Nature communications, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 48 papers.

0numbers the graph read from it
0cells of the map it votes in
48citing papers in PubMed
10.9field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

48 citing papers in PubMed, 76 citations in OpenAlex.

  1. Article
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  7. Epigenomics and Non-Coding RNAs in Soybean Adaptation to Abiotic Stresses.International journal of molecular sciences · 2025
    Review
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  17. Expansion of the MutS Gene Family in Plants.bioRxiv : the preprint server for biology · 2024
    Article
  18. Grafting based DNA methylation alteration of snoRNAs in upland cotton (Physiology and molecular biology of plants : an international journal of functional plant biology · 2024
    Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 4 institutions in 1 country.

Hardik KundariyaDepartment of Agronomy and Horticulture, University of Nebraska, Lincoln, NE, USA.ORCID 0000-0002-4065-3888
Xiaodong YangDepartment of Biology, The Pennsylvania State University, University Park, PA, USA.ORCID 0000-0002-4971-2362
Kyla MortonEpiCrop Technologies, Inc., Lincoln, NE, USA.ORCID 0000-0001-5952-2266
Robersy SanchezDepartment of Biology, The Pennsylvania State University, University Park, PA, USA.ORCID 0000-0002-5246-1453
Michael J AxtellDepartment of Biology, The Pennsylvania State University, University Park, PA, USA.
Samuel F HuttonGulf Coast Research and Education Center, IFAS, University of Florida, Wimauma, FL, USA.
Michael FrommEpiCrop Technologies, Inc., Lincoln, NE, USA.
Sally A MackenzieDepartments of Biology and Plant Science, The Pennsylvania State University, University Park, PA, USA. sam795@psu.edu.ORCID 0000-0003-2077-5607
Pennsylvania State University · USEpicrop Technologies (United States) · USUniversity of Florida · USUniversity of Nebraska–Lincoln · US

Funding

Modeling stress-induced, de novo epiallele architecture in the model Arabidopsis as a tractable entrypointR01GM134056 · NIGMS · PENNSYLVANIA STATE UNIVERSITY, THE · PI MACKENZIE, SALLY A · 2019 to 2022
$1.3M
NIGMS NIH HHS R01 GM134056
6 · The paper itself

Abstract

Plants transmit signals long distances, as evidenced in grafting experiments that create distinct rootstock-scion junctions. Noncoding small RNA is a signaling molecule that is graft transmissible, participating in RNA-directed DNA methylation; but the meiotic transmissibility of graft-mediated epigenetic changes remains unclear. Here, we exploit the MSH1 system in Arabidopsis and tomato to introduce rootstock epigenetic variation to grafting experiments. Introducing mutations dcl2, dcl3 and dcl4 to the msh1 rootstock disrupts siRNA production and reveals RdDM targets of methylation repatterning. Progeny from grafting experiments show enhanced growth vigor relative to controls. This heritable enhancement-through-grafting phenotype is RdDM-dependent, involving 1380 differentially methylated genes, many within auxin-related gene pathways. Growth vigor is associated with robust root growth of msh1 graft progeny, a phenotype associated with auxin transport based on inhibitor assays. Large-scale field experiments show msh1 grafting effects on tomato plant performance, heritable over five generations, demonstrating the agricultural potential of epigenetic variation.

Indexed as

ArabidopsisArabidopsis ProteinsDNA MethylationEpigenesis, GeneticMutationMutS DNA Mismatch-Binding ProteinPhenotypePlant BreedingPlant ProteinsPlant RootsPlants, Genetically ModifiedRNA, PlantRNA, Small InterferingSignal TransductionSolanum lycopersicumArabidopsis ProteinsMSH1 protein, ArabidopsisMutS DNA Mismatch-Binding ProteinPlant ProteinsRNA, PlantRNA, Small Interfering

Identifiers

PMID33093443
PMCPMC7582163
OpenAlexW3093976836

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.