Evidence map›Paper›PMID 33093201›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2020

SurA is a cryptically grooved chaperone that expands unfolded outer membrane proteins.

Dagan C Marx, Ashlee M Plummer, Anneliese M Faustino, Taylor Devlin, Michaela A Roskopf, Mathis J Leblanc, Henry J Lessen, Barbara T Amann, Patrick J Fleming, Susan Krueger and 2 more

Open access · greenAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 28 papers.

0numbers the graph read from it
0cells of the map it votes in
28citing papers in PubMed
2.3field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

28 citing papers in PubMed, 44 citations in OpenAlex.

  1. Article
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  4. Review
  5. A fluorescent reporter and single-turnover kinetics reveal insight into BAM complex function.Proceedings of the National Academy of Sciences of the United States of America · 2025
    Article
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  9. Article
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  13. Proteogenomic Characterization ofMicroorganisms · 2024
    Article
  14. Review
  15. Article
  16. FkpA enhances membrane protein folding using an extensive interaction surface.Protein science : a publication of the Protein Society · 2023
    Article
  17. Article
  18. Article
  19. Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 2 institutions in 1 country.

Dagan C MarxThomas C. Jenkins Department of Biophysics, Johns Hopkins University, Baltimore, MD 21218.ORCID 0000-0003-0149-3778
Ashlee M PlummerThomas C. Jenkins Department of Biophysics, Johns Hopkins University, Baltimore, MD 21218.
Anneliese M FaustinoDepartment of Chemistry, Johns Hopkins University, Baltimore, MD 21218.ORCID 0000-0003-1743-9186
Taylor DevlinThomas C. Jenkins Department of Biophysics, Johns Hopkins University, Baltimore, MD 21218.
Michaela A RoskopfThomas C. Jenkins Department of Biophysics, Johns Hopkins University, Baltimore, MD 21218.
Mathis J LeblancThomas C. Jenkins Department of Biophysics, Johns Hopkins University, Baltimore, MD 21218.
Henry J LessenThomas C. Jenkins Department of Biophysics, Johns Hopkins University, Baltimore, MD 21218.
Barbara T AmannThomas C. Jenkins Department of Biophysics, Johns Hopkins University, Baltimore, MD 21218.ORCID 0000-0002-7839-9029
Patrick J FlemingThomas C. Jenkins Department of Biophysics, Johns Hopkins University, Baltimore, MD 21218.
Susan KruegerNational Institute of Standards and Technology, Gaithersburg, MD 20899.
Stephen D FriedDepartment of Chemistry, Johns Hopkins University, Baltimore, MD 21218.
Karen G FlemingThomas C. Jenkins Department of Biophysics, Johns Hopkins University, Baltimore, MD 21218; karen.fleming@jhu.edu.ORCID 0000-0001-5417-8830
Johns Hopkins University · USNational Institute of Standards and Technology · US

Funding

PROGRAM IN MOLECULAR BIOPHYSICST32GM008403 · NIGMS · JOHNS HOPKINS UNIVERSITY · PI BARRICK, DOUGLAS E. · 1990 to 2019
$13.5M
Membrane Protein StabilityR01GM079440 · NIGMS · JOHNS HOPKINS UNIVERSITY · PI FLEMING, KAREN G. · 2009 to 2022
$4.1M
NIGMS NIH HHS R01 GM079440NIGMS NIH HHS T32 GM008403
6 · The paper itself

Abstract

The periplasmic chaperone network ensures the biogenesis of bacterial outer membrane proteins (OMPs) and has recently been identified as a promising target for antibiotics. SurA is the most important member of this network, both due to its genetic interaction with the β-barrel assembly machinery complex as well as its ability to prevent unfolded OMP (uOMP) aggregation. Using only binding energy, the mechanism by which SurA carries out these two functions is not well-understood. Here, we use a combination of photo-crosslinking, mass spectrometry, solution scattering, and molecular modeling techniques to elucidate the key structural features that define how SurA solubilizes uOMPs. Our experimental data support a model in which SurA binds uOMPs in a groove formed between the core and P1 domains. This binding event results in a drastic expansion of the rest of the uOMP, which has many biological implications. Using these experimental data as restraints, we adopted an integrative modeling approach to create a sparse ensemble of models of a SurA•uOMP complex. We validated key structural features of the SurA•uOMP ensemble using independent scattering and chemical crosslinking data. Our data suggest that SurA utilizes three distinct binding modes to interact with uOMPs and that more than one SurA can bind a uOMP at a time. This work demonstrates that SurA operates in a distinct fashion compared to other chaperones in the OMP biogenesis network.

Indexed as

Bacterial Outer MembraneBacterial Outer Membrane ProteinsCarrier ProteinsCell MembraneEscherichia coliEscherichia coli ProteinsModels, BiologicalMolecular ChaperonesPeptidylprolyl IsomerasePeriplasmProtein FoldingBacterial Outer Membrane ProteinsCarrier ProteinsEscherichia coli ProteinsMolecular ChaperonesPeptidylprolyl IsomeraseSurA protein, E colicrosslinking mass spectrometryintegrative/hybrid structural biologyouter membrane protein biogenesisperiplasmic chaperonessmall-angle neutron scattering

Identifiers

PMID33093201
PMCPMC7668074
OpenAlexW3093855154

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.