Evidence map›Paper›PMID 33092942›Full record

ReviewTrends in cell biology2021

Metabolic Coordination of Cell Fate by α-Ketoglutarate-Dependent Dioxygenases.

Sanjeethan C Baksh, Lydia W S Finley

Open access · bronzeAbstract readReview
In one paragraph

Review in Trends in cell biology, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 111 papers.

0numbers the graph read from it
0cells of the map it votes in
111citing papers in PubMed
5.0field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

111 citing papers in PubMed, 130 citations in OpenAlex.

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51 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors at 2 institutions in 1 country.

Sanjeethan C BakshRobin Chemers Neustein Laboratory of Mammalian Cell Biology and Development, Howard Hughes Medical Institute, The Rockefeller University, New York, NY, USA.
Lydia W S FinleyCell Biology Program, Memorial Sloan Kettering Cancer Center, New York, NY, USA; Center for Epigenetics Research, Memorial Sloan Kettering Cancer Center, New York, NY, USA. Electronic address: finleyl@mskcc.org.
Memorial Sloan Kettering Cancer Center · USRockefeller University · US

Funding

X-RAY CRYSTALLOGRAPHYP30CA008748 · NCI · SLOAN-KETTERING INSTITUTE FOR CANCER RES · PI Nicholas D Socci · 1985 to 2026
$347.4M
Regulation of tumor suppression by alpha-ketoglutarateR37CA252305 · NCI · SLOAN-KETTERING INST CAN RESEARCH · PI FINLEY, LYDIA · 2020 to 2025
$3.4M
Dissecting the role of serine metabolism in tumor initiating stem cellsF31CA236465 · NCI · WEILL MEDICAL COLL OF CORNELL UNIV · PI BAKSH, SANJEETHAN · 2018 to 2021
$193k
NCI NIH HHS F31 CA236465NCI NIH HHS P30 CA008748NCI NIH HHS R37 CA252305
6 · The paper itself

Abstract

Cell fate determination requires faithful execution of gene expression programs, which are increasingly recognized to respond to metabolic inputs. In particular, the family of α-ketoglutarate (αKG)-dependent dioxygenases, which include several chromatin-modifying enzymes, are emerging as key mediators of metabolic control of cell fate. αKG-dependent dioxygenases consume the metabolite αKG (also known as 2-oxoglutarate) as an obligate cosubstrate and are inhibited by succinate, fumarate, and 2-hydroxyglutarate. Here, we review the role of these metabolites in the control of dioxygenase activity and cell fate programs. We discuss the biochemical and transcriptional mechanisms enabling these metabolites to control cell fate and review evidence that nutrient availability shapes tissue-specific fate programs via αKG-dependent dioxygenases.

Indexed as

Cell LineageAlpha-Ketoglutarate-Dependent Dioxygenase FTOAnimalsEnhancer Elements, GeneticHumansMutationNeoplasmsTranscription FactorsAlpha-Ketoglutarate-Dependent Dioxygenase FTOTranscription Factors2-hydroxyglutaratealpha-ketoglutaratecell fatechromatin modificationssuccinateαKG-dependent dioxygenases

Identifiers

PMID33092942
PMCPMC7748998
OpenAlexW3094521060

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.