Evidence map›Paper›PMID 33091877›Full record

ArticleAging2020

RNA-seq reveals the diverse effects of substrate stiffness on epidermal ovarian cancer cells.

Xiaoxu Yang, Guohui Wang, Xiaolei Huang, Min Cheng, Yangyang Han

Erratum issuedOpen access · greenAbstract read
In one paragraph

Article in Aging, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
0.4field-weighted citation impact, top 41% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 9 citations in OpenAlex.

  1. Review
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  6. The molecular and clinical role of Tensin 1/2/3 in cancer.Journal of cellular and molecular medicine · 2023
    Review
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4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

Xiaoxu YangSchool of Life Science and Technology, Weifang Medical University, Weifang 261053, Shandong, P.R. China.
Guohui WangSchool of Life Science and Technology, Weifang Medical University, Weifang 261053, Shandong, P.R. China.
Xiaolei HuangSchool of Life Science and Technology, Weifang Medical University, Weifang 261053, Shandong, P.R. China.
Min ChengDepartment of Physiology, Weifang Medical University, Weifang 261053, Shandong, P.R. China.
Yangyang HanSchool of Life Science and Technology, Weifang Medical University, Weifang 261053, Shandong, P.R. China.
Weifang Medical University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundIncreasing evidence has confirmed that ovarian cancer is a mechanically responsive tumor both

resultsTo address these limitations, we used a polyacrylamide hydrogel system with a tunable Young's modulus that broadly ranged from soft (1 kPa) to normal (6 kPa) and stiff (60 kPa) and investigated the effect of substrate rigidity on the morphology, spreading area, and cytoskeleton of SKOV-3 epidermal ovarian cancer (EOC) cells. RNA-seq analysis of these cells was then performed at appropriate timepoints to map the transcriptome-wide changes associated with stiffness sensing. We identified a large number of stiffness-sensing genes as well as many genes that were enriched in cancer-related pathways. Informed by these diverse expression results and based on bioinformatics analysis, we evaluated the hypothesis that PLEC and TNS2, which are located in focal adhesions and regulated by lnc-ZNF136, may play key roles in the EOC response to substrate stiffness.

conclusionOverall, the results of the present study reveal previously unknown features of the EOC stiffness response and provide new insights into EOC metastasis in the clinic.

Indexed as

Acrylic ResinsCulture MediaElastic ModulusRNA-SeqBiomechanical PhenomenaFemaleHumansOvarian NeoplasmsTumor Cells, CulturedAcrylic ResinsCulture Mediapolyacrylamide gelsepidermal ovarian cancermetastasisRNA-seqsubstrate stiffness

Identifiers

PMID33091877
PMCPMC7655203
OpenAlexW3093915297

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.