Evidence map›Paper›PMID 33089076›Full record

ArticleFASEB bioAdvances2020

Development of a novel secondary phenotypic screen to identify hits within the mycobacterial protein synthesis pipeline.

Christopher Burke, Monika Jankute, Patrick Moynihan, Ruben Gonzalez Del Rio, Xiaojun Li, Jorge Esquivias, Joël Lelièvre, Jonathan A G Cox, James Sacchettini, Gurdyal S Besra

Open access · goldAbstract read
In one paragraph

Article in FASEB bioAdvances, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
0.1field-weighted citation impact, top 53% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 4 citations in OpenAlex.

  1. Article
  2. "Upcycling" known molecules and targets for drug-resistant TB.Frontiers in cellular and infection microbiology · 2022
    Article
  3. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 5 institutions in 4 countries.

Christopher BurkeInstitute of Microbiology and Infection School of Biosciences University of Birmingham Birmingham UK.
Monika JankuteInstitute of Microbiology and Infection School of Biosciences University of Birmingham Birmingham UK.
Patrick MoynihanInstitute of Microbiology and Infection School of Biosciences University of Birmingham Birmingham UK.
Ruben Gonzalez Del RioDiseases of the Developing World GlaxoSmithKline Tres Cantos Madrid Spain.
Xiaojun LiDepartment of Biochemistry and Biophysics Texas A&M University College Station Texas United States.
Jorge EsquiviasDiseases of the Developing World GlaxoSmithKline Tres Cantos Madrid Spain.
Joël LelièvreDiseases of the Developing World GlaxoSmithKline Tres Cantos Madrid Spain.
Jonathan A G CoxSchool of Life & Health Sciences Aston University Birmingham UK.
James SacchettiniDepartment of Biochemistry and Biophysics Texas A&M University College Station Texas United States.
Gurdyal S BesraInstitute of Microbiology and Infection School of Biosciences University of Birmingham Birmingham UK.
University of Birmingham · GBGlaxoSmithKline (Spain) · ESTexas A&M University · USAston University · GBGlaxoSmithKline (France) · FR

Funding

Medical Research Council MR/R001154/1Medical Research Council MR/S000542/1
6 · The paper itself

Abstract

backgroundWhole-cell phenotypic screening is the driving force behind modern anti-tubercular drug discovery efforts. Focus has shifted from screening for bactericidal scaffolds to screens incorporating target deconvolution. Target-based screening aims to direct drug discovery toward known effective targets and avoid investing resources into unproductive lines of enquiry. The protein synthesis pipeline, including RNA polymerase and the ribosome, is a clinically proven target in

methodsUsing

resultsThe assay was validated using known inhibitors of protein synthesis to show a dose-dependent reduction in mCherry fluorescence. This was expanded to a proprietary screen of hypothetical protein synthesis hits and modified to include quantitative viability measurement of cells using resazurin.

conclusionFollowing the success of the proprietary screen, a larger scale screen of the GlaxoSmithKline anti-tubercular library containing 2799 compounds was conducted. Combined single shot and dose-response screening yielded 18 hits, 0.64% of all screened compounds.

Indexed as

mCherrymycobacteriaribosomeRNA polymerasetranscriptiontranslation

Identifiers

PMID33089076
PMCPMC7566049
OpenAlexW3047332666

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.