Evidence map›Paper›PMID 33084965›Full record

ArticlePlant cell reports2021

IbERF71, with IbMYB340 and IbbHLH2, coregulates anthocyanin accumulation by binding to the IbANS1 promoter in purple-fleshed sweet potato (Ipomoea batatas L.).

Zhiyuan Ning, Kangdi Hu, Zhilin Zhou, Donglan Zhao, Jun Tang, Hong Wang, Lixia Li, Chen Ding, Xiaoyan Chen, Gaifang Yao and 1 more

Abstract read
PubMed Publisher
In one paragraph

Article in Plant cell reports, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed, 1 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed, 1 synthesis or guideline pooled it.

  1. Pooled it
  2. Article
  3. Article
  4. Article
  5. Article
  6. International journal of molecular sciences · 2024
    Article
  7. Article
  8. Review
  9. Article
  10. Genome-wide identification and expression analysis of the bHLH gene family in cauliflower (Physiology and molecular biology of plants : an international journal of functional plant biology · 2022
    Article
  11. Article
  12. Review
  13. Article
  14. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors.

Zhiyuan NingSchool of Food and Biological Engineering, Hefei University of Technology, Hefei, 230009, China.
Kangdi Hu *School of Food and Biological Engineering, Hefei University of Technology, Hefei, 230009, China.
Zhilin Zhou *Xuzhou Institute of Agricultural Sciences of the Xuhuai District of Jiangsu Province, Jiangsu Xuzhou Sweetpotato Research Center, Xuzhou, 221131, China.
Donglan ZhaoXuzhou Institute of Agricultural Sciences of the Xuhuai District of Jiangsu Province, Jiangsu Xuzhou Sweetpotato Research Center, Xuzhou, 221131, China.
Jun TangXuzhou Institute of Agricultural Sciences of the Xuhuai District of Jiangsu Province, Jiangsu Xuzhou Sweetpotato Research Center, Xuzhou, 221131, China.
Hong WangInstitute of Pomology/Jiangsu Key Laboratory for Horticultural Crop Genetic Improvement, Jiangsu Academy of Agricultural Sciences, Nanjing, 210014, China.
Lixia LiSchool of Food and Biological Engineering, Hefei University of Technology, Hefei, 230009, China.
Chen DingSchool of Food and Biological Engineering, Hefei University of Technology, Hefei, 230009, China.
Xiaoyan ChenSchool of Food and Biological Engineering, Hefei University of Technology, Hefei, 230009, China.
Gaifang YaoSchool of Food and Biological Engineering, Hefei University of Technology, Hefei, 230009, China. yaogaifang@hfut.edu.cn.
Hua ZhangSchool of Food and Biological Engineering, Hefei University of Technology, Hefei, 230009, China. hzhanglab@hfut.edu.cn.ORCID http://orcid.org/0000-0002-8406-8373

Funding

Earmarked Fund for China Agriculture Research System CARS-10-B1Key Technologies Research and Development Program 2019YFD1001303, 2019YFD1001300National Natural Science Foundation of China 31670278National Natural Science Foundation of China 31872078National Natural Science Foundation of China 31901993National Natural Science Foundation of China 31970200National Natural Science Foundation of China 31970312National Undergraduate Training Programs for Innovation of China No.202010359064Natural Science Foundation of Anhui Province 1908085MC72the Fundamental Research Funds for the Central Universities JZ2020YYPY0249the Key Research and Development Program of Anhui Province 201904a06020031
6 · The paper itself

Abstract

key messageThe transcription factor (TF) IbERF71 forms a novel complex, IbERF71-IbMYB340-IbbHLH2, to coregulate anthocyanin biosynthesis by binding to the IbANS1 promoter in purple-fleshed sweet potatoes. Purple-fleshed sweet potato (Ipomoea batatas L.) is very popular because of its abundant anthocyanins, which are natural pigments with multiple physiological functions. TFs involved in regulating anthocyanin biosynthesis have been identified in many plants. However, the molecular mechanism of anthocyanin biosynthesis in purple-fleshed sweet potatoes has rarely been examined. In this study, TF IbERF71 and its partners were screened by bioinformatics and RT-qPCR analysis. The results showed that the expression levels of IbERF71 and partners IbMYB340 and IbbHLH2 were higher in purple-fleshed sweet potatoes than in other colors and that the expression levels positively correlated with anthocyanin contents. Moreover, transient expression assays showed that cotransformation of IbMYB340+IbbHLH2 resulted in anthocyanin accumulation in tobacco leaves and strawberry receptacles, and additional IbERF71 significantly increased visual aspects. Furthermore, the combination of the three TFs significantly increased the expression levels of FvANS and FvGST, which are involved in anthocyanin biosynthesis and transport of strawberry receptacles. The dual-luciferase reporter system verified that cotransformation of the three TFs enhanced the transcription activity of IbANS1. In addition, yeast two-hybrid and firefly luciferase complementation assays revealed that IbMYB340 interacted with IbbHLH2 and IbERF71 but IbERF71 could not interact with IbbHLH2 in vitro. In summary, our findings provide novel evidence that IbERF71 and IbMYB340-IbbHLH2 form the regulatory complex IbERF71-IbMYB340-IbbHLH2 that coregulates anthocyanin accumulation by binding to the IbANS1 promoter in purple-fleshed sweet potatoes. Thus, the present study provides a new regulatory network of anthocyanin biosynthesis and strong insight into the color development of purple-fleshed sweet potatoes.

Indexed as

AnthocyaninsFragariaGene Expression Regulation, PlantIpomoea batatasNicotianaPigmentationPlant ProteinsPlants, Genetically ModifiedPromoter Regions, GeneticProtein Interaction MapsTranscription FactorsAnthocyaninsPlant ProteinsTranscription FactorsAnthocyanin biosynthesisIbERF71IbMYB340Purple-fleshed sweet potato (Ipomoea batatas L.)Regulatory complex

Identifiers

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.