Evidence map›Paper›PMID 33082936›Full record

ArticleF1000Research2020

Inducible TDG knockout models to study epigenetic regulation.

Simon D Schwarz, Eliane Grundbacher, Alexandra M Hrovat, Jianming Xu, Anna Kuśnierczyk, Cathrine B Vågbø, Primo Schär, David Schuermann

Open access · goldAbstract read
In one paragraph

Article in F1000Research, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
0.2field-weighted citation impact, top 49% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 4 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 3 institutions in 3 countries.

Simon D SchwarzDepartment of Biomedicine, University of Basel, Basel, 4058, Switzerland.ORCID 0000-0002-6630-861X
Eliane GrundbacherDepartment of Biomedicine, University of Basel, Basel, 4058, Switzerland.
Alexandra M HrovatDepartment of Biomedicine, University of Basel, Basel, 4058, Switzerland.ORCID 0000-0002-6255-4258
Jianming XuDepartment of Biomedicine, University of Basel, Basel, 4058, Switzerland.
Anna KuśnierczykProteomics and Modomics Experimental Core Facility (PROMEC), Norwegian University of Science and Technology, Trondheim, 7491, Norway.
Cathrine B VågbøProteomics and Modomics Experimental Core Facility (PROMEC), Norwegian University of Science and Technology, Trondheim, 7491, Norway.
Primo SchärDepartment of Biomedicine, University of Basel, Basel, 4058, Switzerland.ORCID 0000-0003-1843-6147
David SchuermannDepartment of Biomedicine, University of Basel, Basel, 4058, Switzerland.ORCID 0000-0003-2904-1378
Western University · CANorwegian University of Science and Technology · NOUniversity of Basel · CH

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Mechanistic and functional studies by gene disruption or editing approaches often suffer from confounding effects like compensatory cellular adaptations generated by clonal selection. These issues become particularly relevant when studying factors directly involved in genetic or epigenetic maintenance. To provide a genetic tool for functional and mechanistic investigation of DNA-repair mediated active DNA demethylation, we generated experimental models in mice and murine embryonic stem cells (ESCs) based on a minigene of the thymine-DNA glycosylase (TDG). The

Indexed as

Thymine DNA GlycosylaseAnimalsDNA MethylationDNA RepairEmbryonic Stem CellsEpigenesis, GeneticMiceThymine DNA GlycosylaseActive DNA DemethylationBase Excision RepairCre/loxPEmbryonic Stem CellsMinigeneNeuronal DifferentiationTamoxifenTDG

Identifiers

PMID33082936
PMCPMC7527862
OpenAlexW3084362932

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.