Evidence map›Paper›PMID 33082879›Full record

ReviewBeilstein journal of organic chemistry2020

Computational tools for drawing, building and displaying carbohydrates: a visual guide.

Kanhaya Lal, Rafael Bermeo, Serge Perez

Abstract readReview
In one paragraph

Review in Beilstein journal of organic chemistry, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed.

  1. Article
  2. Article
  3. Introduction of a human- and keyboard-friendly N-glycan nomenclature.Beilstein journal of organic chemistry · 2024
    Article
  4. Review
  5. Article
  6. Review
  7. GlycoBioinformatics.Beilstein journal of organic chemistry · 2021
    Article
  8. Three-Dimensional Structures of Carbohydrates and Where to Find Them.International journal of molecular sciences · 2020
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors.

Kanhaya Lal *Univ. Grenoble Alpes, CNRS, CERMAV, 38000 Grenoble, France.ORCID https://orcid.org/0000-0001-8555-7948
Rafael Bermeo *Univ. Grenoble Alpes, CNRS, CERMAV, 38000 Grenoble, France.ORCID https://orcid.org/0000-0002-4451-878X
Serge PerezUniv. Grenoble Alpes, CNRS, CERMAV, 38000 Grenoble, France.ORCID https://orcid.org/0000-0003-3464-5352

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Drawing and visualisation of molecular structures are some of the most common tasks carried out in structural glycobiology, typically using various software. In this perspective article, we outline developments in the computational tools for the sketching, visualisation and modelling of glycans. The article also provides details on the standard representation of glycans, and glycoconjugates, which helps the communication of structure details within the scientific community. We highlight the comparative analysis of the available tools which could help researchers to perform various tasks related to structure representation and model building of glycans. These tools can be useful for glycobiologists or any researcher looking for a ready to use, simple program for the sketching or building of glycans.

Indexed as

bioinformaticscarbohydrateglycanglycobiologynomenclatureoligosaccharidepolysacchariderepresentationstructure

Identifiers

PMID33082879
PMCPMC7537382

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.