Evidence map›Paper›PMID 33082360›Full record

ArticleScientific reports2020

A putative chordate luciferase from a cosmopolitan tunicate indicates convergent bioluminescence evolution across phyla.

Michael Tessler, Jean P Gaffney, Anderson G Oliveira, Andrew Guarnaccia, Krista C Dobi, Nehaben A Gujarati, Moira Galbraith, Jeremy D Mirza, John S Sparks, Vincent A Pieribone and 2 more

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
1.6field-weighted citation impact, top 16% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 25 citations in OpenAlex.

  1. Article
  2. Article
  3. Glowing wonders: exploring the diversity and ecological significance of bioluminescent organisms in Brazil.Photochemical & photobiological sciences : Official journal of the European Photochemistry Association and the European Society for Photobiology · 2024
    Review
  4. Article
  5. Article
  6. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 8 institutions in 2 countries.

Michael TesslerSackler Institute for Comparative Genomics, American Museum of Natural History, New York, NY, 10024, USA. mtessler@sfc.edu.
Jean P GaffneyDepartment of Natural Sciences, Baruch College, City University of New York, New York, NY, 10010, USA. jean.gaffney@baruch.cuny.edu.
Anderson G OliveiraDepartamento de Oceanografia Física, Química e, Geológica, Instituto Oceanográfico, Universidade de São Paulo, São Paulo, 05508-120, Brazil.
Andrew GuarnacciaDepartment of Natural Sciences, Baruch College, City University of New York, New York, NY, 10010, USA.
Krista C DobiDepartment of Natural Sciences, Baruch College, City University of New York, New York, NY, 10010, USA.
Nehaben A GujaratiDepartment of Natural Sciences, Baruch College, City University of New York, New York, NY, 10010, USA.
Moira GalbraithInstitute of Ocean Sciences, 9860 West Saanich Road, P.O. Box 6000, Sidney, BC, V8L 4B2, Canada.
Jeremy D MirzaDepartamento de Oceanografia Física, Química e, Geológica, Instituto Oceanográfico, Universidade de São Paulo, São Paulo, 05508-120, Brazil.
John S SparksSackler Institute for Comparative Genomics, American Museum of Natural History, New York, NY, 10024, USA.
Vincent A PieriboneCellular and Molecular Physiology, Yale University, New Haven, CT, USA.
Robert J WoodWyss Institute for Biologically Inspired Engineering, Harvard University, Cambridge, MA, USA.
David F GruberSackler Institute for Comparative Genomics, American Museum of Natural History, New York, NY, 10024, USA. david.gruber@baruch.cuny.edu.
Baruch College · USAmerican Museum of Natural History · USCity University of New York · USHarvard University · USThe Graduate Center, CUNY · USUniversidade de São Paulo · BRUniversidade Federal de São Paulo · BRYale University · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Pyrosomes are tunicates in the phylum Chordata, which also contains vertebrates. Their gigantic blooms play important ecological and biogeochemical roles in oceans. Pyrosoma, meaning "fire-body", derives from their brilliant bioluminescence. The biochemistry of this light production is unknown, but has been hypothesized to be bacterial in origin. We found that mixing coelenterazine-a eukaryote-specific luciferin-with Pyrosoma atlanticum homogenate produced light. To identify the bioluminescent machinery, we sequenced P. atlanticum transcriptomes and found a sequence match to a cnidarian luciferase (RLuc). We expressed this novel luciferase (PyroLuc) and, combined with coelenterazine, it produced light. A similar gene was recently predicted from a bioluminescent brittle star, indicating that RLuc-like luciferases may have evolved convergently from homologous dehalogenases across phyla (Cnidaria, Echinodermata, and Chordata). This report indicates that a widespread gene may be able to functionally converge, resulting in bioluminescence across animal phyla, and describes and characterizes the first putative chordate luciferase.

Indexed as

UrochordataAnimalsBiological EvolutionChordataComputational BiologyEvolution, MolecularGene Expression ProfilingImidazolesLuciferasesLuminescenceLuminescent MeasurementsModels, MolecularPhylogenyPyrazinesSequence AlignmentSequence Analysis, DNAcoelenterazineImidazolesLuciferasesPyrazines

Identifiers

PMID33082360
PMCPMC7576829
OpenAlexW3093500461

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.