Evidence map›Paper›PMID 33082346›Full record

SynthesisNature communications2020

Genome-wide association study of smoking trajectory and meta-analysis of smoking status in 842,000 individuals.

Ke Xu, Boyang Li, Kathleen A McGinnis, Rachel Vickers-Smith, Cecilia Dao, Ning Sun, Rachel L Kember, Hang Zhou, William C Becker, Joel Gelernter and 4 more

Open access · goldAbstract readMeta-Analysis
In one paragraph

Synthesis in Nature communications, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 80 papers, 7 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
80citing papers in PubMed, 7 pooled it
7.8field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

80 citing papers in PubMed, 7 syntheses or guidelines pooled it, 121 citations in OpenAlex.

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20 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors at 4 institutions in 1 country.

Ke XuYale School of Medicine, New Haven, CT, 06511, USA.
Boyang LiVA Connecticut Healthcare System, West Haven, CT, 06516, USA.ORCID 0000-0003-2808-9986
Kathleen A McGinnisVA Connecticut Healthcare System, West Haven, CT, 06516, USA.
Rachel Vickers-SmithUniversity of Kentucky College of Public Health, Lexington, KY, 40536, USA.
Cecilia DaoVA Connecticut Healthcare System, West Haven, CT, 06516, USA.
Ning SunYale School of Public Health, New Haven, CT, 06511, USA.
Rachel L KemberUniversity of Pennsylvania Perelman School of Medicine, Philadelphia, PA, 19104, USA.
Hang ZhouYale School of Medicine, New Haven, CT, 06511, USA.ORCID 0000-0002-7694-6391
William C BeckerYale School of Medicine, New Haven, CT, 06511, USA.
Joel GelernterYale School of Medicine, New Haven, CT, 06511, USA.ORCID 0000-0002-4067-1859
Henry R KranzlerUniversity of Pennsylvania Perelman School of Medicine, Philadelphia, PA, 19104, USA.ORCID 0000-0002-1018-0450
Hongyu ZhaoYale School of Medicine, New Haven, CT, 06511, USA.ORCID 0000-0003-1195-9607
Amy C JusticeYale School of Medicine, New Haven, CT, 06511, USA. amy.justice@yale.edu.ORCID 0000-0003-0139-5502
VA Million Veteran Program
Yale University · USVeterans Health Administration · USUniversity of Kentucky · USVA Connecticut Healthcare System · US

Funding

Yale Clinical and Translational Science Award (U Component)UL1TR001863 · NCATS · YALE UNIVERSITY · PI John H. Krystal, LUCILA OHNO-MACHADO · 2016 to 2026
$102.9M
Enhancing Discovery of HIV Host Genetics using Drug Abuse and other InteractionsR01DA038632 · NIDA · RESEARCH TRIANGLE INSTITUTE · PI JOHNSON, ERIC OTTO · 2014 to 2018
$3.7M
Feature selection of DNA methylation biosignatures for neuropathy with comorbid drug abuse in the setting of HIV infectionR01DA047820 · NIDA · YALE UNIVERSITY · PI AOUIZERAT, BRADLEY E, XU, KE · 2018 to 2022
$2.9M
Defining the impact of injection drug use on antiretroviral therapy and HIV treatment outcomes: an (epi)genomic approachR01DA047063 · NIDA · YALE UNIVERSITY · PI AOUIZERAT, BRADLEY E, XU, KE · 2018 to 2022
$2.4M
Methylome-wide and mQTL analysis of HIV progression in the context of cocaine useR01DA042691 · NIDA · YALE UNIVERSITY · PI XU, KE · 2016 to 2019
$1.6M
BLRD VA I01 BX003341NCATS NIH HHS UL1 TR001863NIDA NIH HHS R01 DA038632NIDA NIH HHS R01 DA042691NIDA NIH HHS R01 DA047063NIDA NIH HHS R01 DA047820
6 · The paper itself

Abstract

Here we report a large genome-wide association study (GWAS) for longitudinal smoking phenotypes in 286,118 individuals from the Million Veteran Program (MVP) where we identified 18 loci for smoking trajectory of current versus never in European Americans, one locus in African Americans, and one in Hispanic Americans. Functional annotations prioritized several dozen genes where significant loci co-localized with either expression quantitative trait loci or chromatin interactions. The smoking trajectories were genetically correlated with 209 complex traits, for 33 of which smoking was either a causal or a consequential factor. We also performed European-ancestry meta-analyses for smoking status in the MVP and GWAS & Sequencing Consortium of Alcohol and Nicotine use (GSCAN) (N

Indexed as

Genome-Wide Association StudyBlack or African AmericanCohort StudiesFemaleHispanic or LatinoHumansLongitudinal StudiesMaleMiddle AgedPolymorphism, Single NucleotideQuantitative Trait LociSmokingWhite People

Identifiers

PMID33082346
PMCPMC7598939
OpenAlexW3094620891

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.