Evidence map›Paper›PMID 33079235›Full record

ArticleWorld journal of microbiology & biotechnology2020

Pleiotropic regulation of daptomycin synthesis by DptR1, a LuxR family transcriptional regulator.

Guanghai Yu, Ming Hui, Ruifang Li, Shuaibing Zhang

Abstract read
PubMed Publisher
In one paragraph

Article in World journal of microbiology & biotechnology, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Article
  2. Improving the Yield and Quality of Daptomycin inFrontiers in microbiology · 2022
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Guanghai YuCollege of Biological Engineering, Henan University of Technology, Zhengzhou, 450001, People's Republic of China. yuguanghai115@126.com.ORCID http://orcid.org/0000-0003-1429-6837
Ming HuiCollege of Biological Engineering, Henan University of Technology, Zhengzhou, 450001, People's Republic of China.
Ruifang LiCollege of Biological Engineering, Henan University of Technology, Zhengzhou, 450001, People's Republic of China.
Shuaibing ZhangCollege of Biological Engineering, Henan University of Technology, Zhengzhou, 450001, People's Republic of China.

Funding

Foundation of Henan Educational Committee No. 16A350014National Natural Science Foundation of China No.21506048Program for Innovative Research Team (in Science and Technology) in University of Henan Province No. 19IRTSTHN008the Basic Scientific Research Fund of He'nan Higher Education No. 2017QNJH13
6 · The paper itself

Abstract

Daptomycin, produced by Streptomyces roseosporus is a novel cyclic lipopeptide antibiotic for treatment of Gram-positive bacteria caused infections. While, the regulatory mechanism of daptomycin synthesis has not been fully understood. Here we reported that DptR1, a LuxR family transcriptional regulator, played a pleiotropic regulatory role on daptomycin synthesis, for the first time. Deletion or over-expressing of dptR1 decreases the daptomycin's production, increases the transcriptional levels of the core dpt genes of day 3 and decreases the transcriptional levels of the core dpt genes of day 4, sharply, which indicates the transcriptional regulation of DptR1 on daptomycin synthesis is complex and time-ordered. The transcriptional levels of dptR2 increase in dptR1 deletion mutant (DR1), but decrease in dptR1 over-expression mutant (OR1), dramatically, compared to the starting strain of Streptomyces roseosporus N3 (WT), on the 3rd day, which indicates that DptR1 represses the transcription of dptR2. While, the transcriptional levels of dptR3 both in DR1 and OR1 decrease obviously, compared to WT, on the 3rd and 4th day. Comparative analysis of promoters' activities, using xylE gene as the reporter, showed that DptR1 activated the transcription of its own gene of dptR1 and represses the transcription of the dptR3 by affecting the promoter activities. While DptR1 may affect the expression of dptR2 indirectly, not by affecting the promoter activity of dptR2. DptR1, a LuxR family transcriptional regulator, played a pleiotropic regulation role on daptomycin synthesis.

Indexed as

Bacterial ProteinsDaptomycinFermentationGene DeletionGene Expression Regulation, BacterialPromoter Regions, GeneticStreptomycesTranscription FactorsBacterial ProteinsDaptomycinTranscription FactorsDaptomycinDptR1Streptomyces roseosporusTranscriptional regulation

Identifiers

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.