Evidence map›Paper›PMID 33078269›Full record

ArticleArchives of microbiology2021

Alternation of soil bacterial and fungal communities by tomato-rice rotation in Hainan Island in Southeast of China.

Xiang Ma, Minglun Du, Peng Liu, Yanqiong Tang, Hong Li, Qianhua Yuan, Yunze Ruan, Lei Meng, Jiachao Zhang, Min Lin and 1 more

Abstract read
PubMed Publisher
In one paragraph

Article in Archives of microbiology, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed, 1 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 1 synthesis or guideline pooled it.

  1. Pooled it
  2. Article
  3. Review
  4. Article
  5. Article
  6. Article
  7. Characterisation ofJournal of fungi (Basel, Switzerland) · 2022
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors.

Xiang MaKey Laboratory of Tropical Biological Resources of Ministry of Education, School of Life and Pharmaceutical Sciences, Hainan University, Haikou, 570228, China.ORCID http://orcid.org/0000-0003-0103-861X
Minglun DuKey Laboratory of Tropical Biological Resources of Ministry of Education, School of Life and Pharmaceutical Sciences, Hainan University, Haikou, 570228, China.
Peng LiuKey Laboratory of Tropical Biological Resources of Ministry of Education, School of Life and Pharmaceutical Sciences, Hainan University, Haikou, 570228, China.
Yanqiong TangKey Laboratory of Tropical Biological Resources of Ministry of Education, School of Life and Pharmaceutical Sciences, Hainan University, Haikou, 570228, China.
Hong LiKey Laboratory of Tropical Biological Resources of Ministry of Education, School of Life and Pharmaceutical Sciences, Hainan University, Haikou, 570228, China.
Qianhua YuanSchool of Tropical Crops, Hainan University, Haikou, 570228, China.
Yunze RuanSchool of Tropical Crops, Hainan University, Haikou, 570228, China.
Lei MengSchool of Tropical Crops, Hainan University, Haikou, 570228, China.
Jiachao ZhangSchool of Tropical Crops, Hainan University, Haikou, 570228, China.
Min LinBiotechnology Research Institute, Chinese Academy of Agricultural Sciences, Beijing, 100081, China.
Zhu LiuKey Laboratory of Tropical Biological Resources of Ministry of Education, School of Life and Pharmaceutical Sciences, Hainan University, Haikou, 570228, China. zhuliu@hainanu.edu.cn.

Funding

Hainan Cultivated Land Improvement and Key Technology Research and Demonstration HNGDgl201502Hainan Provincial Department of Science and Technology 317015National Natural Science Foundation of China 31560021National Natural Science Foundation of China 31772887National Natural Science Foundation of China 31860676National Transgenic Major Project of China 2019ZX08010004
6 · The paper itself

Abstract

Tomato-rice rotation is prevalent in subtropical and tropical regions in China. This practice enhances crop productivity and the disease suppression property of soils against soil-borne plant pathogens. To explore the variations and dynamics of bacterial and fungal communities, bulk soil samples were collected during two consecutive years under a rotation system between tomato and rice originated from the year of 2010 in Hainan Island, and 16S rDNA and ITS amplicons were sequenced by Illumina MiSeq. The results demonstrated that potentially beneficial bacterial phyla Acidobacteria, Chloroflexi and genus Paenibacillus, as well as the fungal genus Mortierella were significantly enriched, while the potentially pathogenic fungal genus Fusarium was significantly decreased during the crop rotation. Measurements of soil physicochemical properties indicated that the soil acidification was improved. Redundancy analysis (RDA) revealed the correlation of the microbial community with soil pH and identified soil total phosphorus (TP) level as the highest determinant factor for both bacterial and fungal communities. This work provides a preliminary description of changes of the bacterial and fungal communities related to tomato-rice rotation in China and offered experimental evidences for exploring the effects of this agricultural practice on soil ecology.

Indexed as

Bacterial Physiological PhenomenaBiodiversityCrop ProductionSoil MicrobiologyBacteriaChinaFungiMicrobiotaOryzaRNA, Ribosomal, 16SSoilSolanum lycopersicumRNA, Ribosomal, 16SSoilIllumina MiSeq sequencingSoil bacterial and fungal communitiesTomato–rice rotation

Identifiers

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Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.