Evidence map›Paper›PMID 33076992›Full record

ArticleArthritis research & therapy2020

Association of TERT and DSP variants with microscopic polyangiitis and myeloperoxidase-ANCA positive vasculitis in a Japanese population: a genetic association study.

Aya Kawasaki, Natsumi Namba, Ken-Ei Sada, Fumio Hirano, Shigeto Kobayashi, Kenji Nagasaka, Takahiko Sugihara, Nobuyuki Ono, Takashi Fujimoto, Makio Kusaoi and 9 more

Open access · goldAbstract read
In one paragraph

Article in Arthritis research & therapy, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
1.3field-weighted citation impact, top 16% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 19 citations in OpenAlex.

  1. Article
  2. Review
  3. Observational
  4. Review
  5. Article
  6. Review
  7. Article
  8. Article
  9. MPO-ANCA positive interstitial pneumonia: Current knowledge and future perspectives.Sarcoidosis, vasculitis, and diffuse lung diseases : official journal of WASOG · 2022
    Review
  10. Antineutrophil cytoplasmic antibody-associated interstitial lung disease: a review.European respiratory review : an official journal of the European Respiratory Society · 2021
    Review
  11. Review
  12. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

19 authors at 10 institutions in 1 country.

Aya KawasakiMolecular and Genetic Epidemiology Laboratory, Faculty of Medicine, University of Tsukuba, 1-1-1 Tennodai, Tsukuba, 305-8575, Japan. a-kawasaki@umin.net.
Natsumi NambaMolecular and Genetic Epidemiology Laboratory, Faculty of Medicine, University of Tsukuba, 1-1-1 Tennodai, Tsukuba, 305-8575, Japan.
Ken-Ei SadaDepartment of Nephrology, Rheumatology, Endocrinology and Metabolism, Graduate School of Medicine, Dentistry and Pharmaceutical Sciences, Okayama University, Okayama, Japan.
Fumio HiranoDepartment of Rheumatology, Graduate School of Medical and Dental Sciences, Tokyo Medical and Dental University, Tokyo, Japan.
Shigeto KobayashiDepartment of Internal Medicine, Juntendo University Koshigaya Hospital, Koshigaya, Japan.
Kenji NagasakaDepartment of Rheumatology, Ome Municipal General Hospital, Ome, Japan.
Takahiko SugiharaDepartment of Rheumatology, Graduate School of Medical and Dental Sciences, Tokyo Medical and Dental University, Tokyo, Japan.
Nobuyuki OnoDepartment of Rheumatology, Saga University, Saga, Japan.
Takashi FujimotoThe Center for Rheumatic Diseases, Nara Medical University, Kashihara, Japan.
Makio KusaoiDepartment of Internal Medicine and Rheumatology, School of Medicine, Juntendo University, Tokyo, Japan.
Naoto TamuraDepartment of Internal Medicine and Rheumatology, School of Medicine, Juntendo University, Tokyo, Japan.
Kunihiro YamagataDepartment of Nephrology, Faculty of Medicine, University of Tsukuba, Tsukuba, Japan.
Takayuki SumidaDepartment of Internal Medicine, Faculty of Medicine, University of Tsukuba, Tsukuba, Japan.
Hiroshi HashimotoSchool of Medicine, Juntendo University, Tokyo, Japan.
Shoichi OzakiDepartment of Internal Medicine, St. Marianna University School of Medicine, Kawasaki, Japan.
Hirofumi MakinoOkayama University, Okayama, Japan.
Yoshihiro ArimuraDepartment of Nephrology and Rheumatology, Kyorin University School of Medicine, Mitaka, Japan.
Masayoshi HarigaiDepartment of Rheumatology, School of Medicine, Tokyo Women's Medical University, Tokyo, Japan.
Naoyuki TsuchiyaMolecular and Genetic Epidemiology Laboratory, Faculty of Medicine, University of Tsukuba, 1-1-1 Tennodai, Tsukuba, 305-8575, Japan. tsuchiya-tky@umin.net.ORCID 0000-0002-6776-5580
University of Tsukuba · JPJuntendo University · JPOkayama University · JPTokyo Medical and Dental University · JPKyorin University · JPNara Medical University · JPOme Municipal General Hospital · JPSaga University · JPSt. Marianna University School of Medicine · JPTokyo Women's Medical University · JP

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundInterstitial lung disease (ILD) is a severe complication with poor prognosis in anti-neutrophil cytoplasmic antibody (ANCA)-associated vasculitis (AAV). Prevalence of AAV-associated ILD (AAV-ILD) in Japan is considerably higher than that in Europe. Recently, we reported that a MUC5B variant rs35705950, the strongest susceptibility variant to idiopathic pulmonary fibrosis (IPF), was strikingly increased in AAV-ILD patients but not in AAV patients without ILD; however, due to the low allele frequency in the Japanese population, the MUC5B variant alone cannot account for the high prevalence of AAV-ILD in Japan. In this study, we examined whether other IPF susceptibility alleles in TERT and DSP genes are associated with susceptibility to AAV subsets and AAV-ILD.

methodsFive hundred and forty-four Japanese patients with AAV and 5558 controls were analyzed. Among the AAV patients, 432 were positive for myeloperoxidase (MPO)-ANCA (MPO-AAV). A total of 176 MPO-AAV patients were positive and 216 were negative for ILD based on CT or high-resolution CT. Genotypes of TERT and DSP variants were determined by TaqMan SNP Genotyping Assay, and their association was tested by chi-square test.

resultsWhen the frequencies of the IPF risk alleles TERT rs2736100A and DSP rs2076295G were compared between AAV subsets and healthy controls, both alleles were significantly increased in microscopic polyangiitis (MPA) (TERT P = 2.3 × 10

conclusionsUnexpectedly, TERT and DSP IPF risk alleles were found to be associated with MPA and MPO-AAV, regardless of the presence of ILD. These findings suggest that TERT and DSP may be novel susceptibility genes to MPA/MPO-AAV and also that some susceptibility genes may be shared between IPF and MPA/MPO-AAV.

Indexed as

Anti-Neutrophil Cytoplasmic Antibody-Associated VasculitisMicroscopic PolyangiitisTelomeraseAntibodies, Antineutrophil CytoplasmicEuropeGenetic Association StudiesHumansJapanPeroxidaseAntibodies, Antineutrophil CytoplasmicPeroxidaseTelomeraseTERT protein, humanMicroscopic polyangiitisMyeloperoxidase-ANCAPolymorphismSingle nucleotide variantSusceptibilityVasculitis

Identifiers

PMID33076992
PMCPMC7574242
OpenAlexW3093017658

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.