Evidence map›Paper›PMID 33075805›Full record

ArticleHuman molecular genetics2020

Conditional deletion of SMN in cell culture identifies functional SMN alleles.

Anton J Blatnik, Vicki L McGovern, Thanh T Le, Chitra C Iyer, Brian K Kaspar, Arthur H M Burghes

Open access · bronzeAbstract read
In one paragraph

Article in Human molecular genetics, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
1.2field-weighted citation impact, top 21% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 16 citations in OpenAlex.

  1. Article
  2. Article
  3. Frontiers in genetics · 2024
    Article
  4. Article
  5. Article
  6. Review
  7. Article
  8. Article
  9. Article
  10. Targeting the 5' untranslated region ofMolecular therapy. Nucleic acids · 2021
    Article
  11. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 3 institutions in 1 country.

Anton J BlatnikOhio State Biochemistry Program.
Vicki L McGovernBiological Chemistry & Pharmacology.
Thanh T LeBiological Chemistry & Pharmacology.
Chitra C IyerBiological Chemistry & Pharmacology.
Brian K KasparCenter for Gene Therapy, Nationwide Children's Hospital; Department of Pediatrics, College of Medicine and Public Health, The Ohio State University; and Department of Neuroscience, The Ohio State University, Columbus, OH 43210, USA.
Arthur H M BurghesOhio State Biochemistry Program.
Nationwide Children's Hospital · USState Library of Ohio · USThe Ohio State University Wexner Medical Center · US

Funding

Therapy for Spinal Muscular AtrophyR01HD060586 · NICHD · OHIO STATE UNIVERSITY · PI BURGHES, ARTHUR H. M. · 2010 to 2021
$3.7M
NICHD NIH HHS R01 HD060586NICHD NIH HHS R01HD060586
6 · The paper itself

Abstract

Spinal muscular atrophy (SMA) is caused by mutation or deletion of survival motor neuron 1 (SMN1) and retention of SMN2 leading to SMN protein deficiency. We developed an immortalized mouse embryonic fibroblast (iMEF) line in which full-length wild-type Smn (flwt-Smn) can be conditionally deleted using Cre recombinase. iMEFs lacking flwt-Smn are not viable. We tested the SMA patient SMN1 missense mutation alleles A2G, D44V, A111G, E134K and T274I in these cells to determine which human SMN (huSMN) mutant alleles can function in the absence of flwt-Smn. All missense mutant alleles failed to rescue survival in the conditionally deleted iMEFs. Thus, the function lost by these mutations is essential to cell survival. However, co-expression of two different huSMN missense mutants can rescue iMEF survival and small nuclear ribonucleoprotein (snRNP) assembly, demonstrating intragenic complementation of SMN alleles. In addition, we show that a Smn protein lacking exon 2B can rescue iMEF survival and snRNP assembly in the absence of flwt-Smn, indicating exon 2B is not required for the essential function of Smn. For the first time, using this novel cell line, we can assay the function of SMN alleles in the complete absence of flwt-Smn.

Indexed as

AllelesAnimalsCell SurvivalDisease Models, AnimalExonsFibroblastsGene Expression Regulation, DevelopmentalHumansIntegrasesMiceMuscular Atrophy, SpinalMutation, MissenseRibonucleoproteins, Small NuclearSurvival of Motor Neuron 1 ProteinSurvival of Motor Neuron 2 ProteinCre recombinaseIntegrasesRibonucleoproteins, Small NuclearSMN1 protein, humanSMN2 protein, humanSurvival of Motor Neuron 1 ProteinSurvival of Motor Neuron 2 Protein

Identifiers

PMID33075805
PMCPMC7946624
OpenAlexW3092809113

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.