Evidence map›Paper›PMID 33072693›Full record

ArticleFrontiers in public health2020

Characterization of Pneumococcal Colonization Dynamics and Antimicrobial Resistance Using Shotgun Metagenomic Sequencing in Intensively Sampled South African Infants.

Rendani I Manenzhe, Felix S Dube, Meredith Wright, Katie Lennard, Stephanie Mounaud, Stephanie W Lo, Heather J Zar, William C Nierman, Mark P Nicol, Clinton Moodley

Open access · goldAbstract read
PubMed Full text at PMC Publisher
In one paragraph

Article in Frontiers in public health, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed, 1 pooled it
0.9field-weighted citation impact, top 24% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 1 synthesis or guideline pooled it, 12 citations in OpenAlex.

  1. Pooled it
  2. Article
  3. Review
  4. Article
  5. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 5 institutions in 4 countries.

Rendani I ManenzheDivision of Medical Microbiology, Faculty of Health Sciences, University of Cape Town, Cape Town, South Africa.
Felix S DubeDivision of Medical Microbiology, Faculty of Health Sciences, University of Cape Town, Cape Town, South Africa.
Meredith WrightJ. Craig Venter Institute, Rockville, MD, United States.
Katie LennardDivision of Computational Biology, Faculty of Health Sciences, University of Cape Town, Cape Town, South Africa.
Stephanie MounaudJ. Craig Venter Institute, Rockville, MD, United States.
Stephanie W LoParasites and Microbes Program, The Wellcome Sanger Institute, Cambridge, United Kingdom.
Heather J ZarDepartment of Paediatrics and Child Health, Red Cross War Memorial Children's Hospital and South African - Medical Research Council Unit on Child & Adolescent Health, University of Cape Town, Cape Town, South Africa.
William C NiermanJ. Craig Venter Institute, Rockville, MD, United States.
Mark P NicolDivision of Medical Microbiology, Faculty of Health Sciences, University of Cape Town, Cape Town, South Africa.
Clinton MoodleyDivision of Medical Microbiology, Faculty of Health Sciences, University of Cape Town, Cape Town, South Africa.
University of Cape Town · ZAJ. Craig Venter Institute · USGroote Schuur Hospital · ZAUniversity of Western Australia · AUWellcome Sanger Institute · GB

Funding

The nasopharyngeal microbiota of African children and lower respiratory tract infectionU54HG009824 · NHGRI · UNIVERSITY OF CAPE TOWN · PI NICOL, MARK PATRICK · 2017 to 2021
$2.9M
NHGRI NIH HHS U54 HG009824
6 · The paper itself

Abstract

PubMed holds no abstract for this paper.

Indexed as

Anti-Bacterial AgentsPneumococcal InfectionsDrug Resistance, BacterialHumansInfantMetagenomeStreptococcus pneumoniaeAnti-Bacterial Agentsmulti locus sequence typingnasopharyngealpneumococcal conjugate vaccineresistance determinantsserotypesshotgun metagenomic sequencingStreptococcus pneumoniae

Identifiers

PMID33072693
PMCPMC7536305
OpenAlexW3089299600

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.