Evidence map›Paper›PMID 33071741›Full record

ArticleFrontiers in neuroscience2020

Snowball ICA: A Model Order Free Independent Component Analysis Strategy for Functional Magnetic Resonance Imaging Data.

Guoqiang Hu, Abigail B Waters, Serdar Aslan, Blaise Frederick, Fengyu Cong, Lisa D Nickerson

Abstract read
In one paragraph

Article in Frontiers in neuroscience, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed.

  1. Review
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  11. Multivariate Analysis and Modelling of multiple Brain endOphenotypes: Let's MAMBO!Computational and structural biotechnology journal · 2021
    Review
  12. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Guoqiang HuSchool of Biomedical Engineering, Faculty of Electronic Information and Electrical Engineering, Dalian University of Technology, Dalian, China.
Abigail B WatersBrain Imaging Center, Mclean Hospital, Belmont, MA, United States.
Serdar AslanBrain Imaging Center, Mclean Hospital, Belmont, MA, United States.
Blaise FrederickBrain Imaging Center, Mclean Hospital, Belmont, MA, United States.
Fengyu CongSchool of Biomedical Engineering, Faculty of Electronic Information and Electrical Engineering, Dalian University of Technology, Dalian, China.
Lisa D NickersonBrain Imaging Center, Mclean Hospital, Belmont, MA, United States.

Funding

Validation of a novel prospective circulatory biomarker for Alzheimer's Disease using the ADNI dataset.R01NS097512 · NINDS · MCLEAN HOSPITAL · PI FREDERICK, BLAISE DEBONNEVAL · 2016 to 2020
$2.7M
Multi-modal MRI data fusion to assess neurobiological effects of marijuana useR01DA037265 · NIDA · MCLEAN HOSPITAL · PI NICKERSON, LISA D · 2014 to 2016
$705k
Sex Differences in the Effects of Alcohol Use Disorder on Brain Circuitry using Existing DataR21AA024565 · NIAAA · MCLEAN HOSPITAL · PI NICKERSON, LISA D · 2016 to 2017
$427k
NIAAA NIH HHS R21 AA024565NIDA NIH HHS R01 DA037265NINDS NIH HHS R01 NS097512
6 · The paper itself

Abstract

In independent component analysis (ICA), the selection of model order (i.e., number of components to be extracted) has crucial effects on functional magnetic resonance imaging (fMRI) brain network analysis. Model order selection (MOS) algorithms have been used to determine the number of estimated components. However, simulations show that even when the model order equals the number of simulated signal sources, traditional ICA algorithms may misestimate the spatial maps of the signal sources. In principle, increasing model order will consider more potential information in the estimation, and should therefore produce more accurate results. However, this strategy may not work for fMRI because large-scale networks are widely spatially distributed and thus have increased mutual information with noise. As such, conventional ICA algorithms with high model orders may not extract these components at all. This conflict makes the selection of model order a problem. We present a new strategy for model order free ICA, called Snowball ICA, that obviates these issues. The algorithm collects all information for each network from fMRI data without the limitations of network scale. Using simulations and

Indexed as

dimension reductionfunctional magnetic resonance imagingindependent component analysismodel ordermutual information

Identifiers

PMID33071741
PMCPMC7530342

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.