Evidence map›Paper›PMID 33068201›Full record

ArticleFunctional & integrative genomics2020

An overview of the transcriptional responses of two tolerant and susceptible sugarcane cultivars to borer (Diatraea saccharalis) infestation.

Uilian Stefanello de Mello, Pedro Marcus Pereira Vidigal, Camilo Elber Vital, Adriano Cirino Tomaz, Milene de Figueiredo, Luiz Alexandre Peternelli, Márcio Henrique Pereira Barbosa

Abstract read
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In one paragraph

Article in Functional & integrative genomics, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
2.1field-weighted citation impact, top 14% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 16 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 1 institution in 1 country.

Uilian Stefanello de Mello *Department of Agronomy, Universidade Federal de Viçosa (UFV), Viçosa, Minas Gerais, Brazil.ORCID https://orcid.org/0000-0003-4534-4651
Pedro Marcus Pereira Vidigal *Núcleo de Análise de Biomoléculas (NuBioMol), Universidade Federal de Viçosa (UFV), Viçosa, Minas Gerais, Brazil. pedro.vidigal@ufv.br.ORCID https://orcid.org/0000-0002-5116-9856
Camilo Elber VitalDepartment of Biochemistry and Molecular Biology, Universidade Federal de Viçosa (UFV), Viçosa, Minas Gerais, Brazil.ORCID https://orcid.org/0000-0002-2567-9780
Adriano Cirino TomazDepartment of Agronomy, Universidade Federal de Viçosa (UFV), Viçosa, Minas Gerais, Brazil.ORCID https://orcid.org/0000-0002-8641-7696
Milene de FigueiredoDepartment of Agronomy, Universidade Federal de Viçosa (UFV), Viçosa, Minas Gerais, Brazil.
Luiz Alexandre PeternelliDepartment of Statistics, Universidade Federal de Viçosa (UFV), Viçosa, Minas Gerais, Brazil.ORCID https://orcid.org/0000-0002-7683-0583
Márcio Henrique Pereira BarbosaDepartment of Agronomy, Universidade Federal de Viçosa (UFV), Viçosa, Minas Gerais, Brazil.ORCID https://orcid.org/0000-0002-5838-9579
Universidade Federal de Viçosa · BR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Diatraea saccharalis constitutes a threat to the sugarcane productivity, and obtaining borer tolerant cultivars is an alternative method of control. Although there are studies about the relationship between the interaction of D. saccharalis with sugarcane, little is known about the molecular and genomic basis of defense mechanisms that confer tolerance to sugarcane cultivars. Here, we analyzed the transcriptional profile of two sugarcane cultivars in response to borer attack, RB867515 and SP80-3280, which are considered tolerant and sensitive to the borer attack, respectively. A sugarcane genome and transcriptome were used for read mapping. Differentially expressed transcripts and genes were identified and termed to as DETs and DEGs, according to the sugarcane database adopted. A total of 745 DETs and 416 DEGs were identified (log

Indexed as

Transcription, GeneticAnimalsCyclopentanesEdible GrainLarvaLepidopteraOxylipinsSaccharumCyclopentanesjasmonic acidOxylipinsBorerDefenseRNA-seqSugarcaneTolerance.Transcriptional response

Identifiers

PMID33068201
OpenAlexW3092734888

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.