Evidence map›Paper›PMID 33067478›Full record

ArticleScientific reports2020

Mineralogy of microbially induced calcium carbonate precipitates formed using single cell drop-based microfluidics.

Neerja M Zambare, Nada Y Naser, Robin Gerlach, Connie B Chang

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
2.3field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed, 65 citations in OpenAlex.

  1. Article
  2. Isolation and characterization of ureolytic bacteria driving microbially induced calcite precipitation in cement contaminated soil.International microbiology : the official journal of the Spanish Society for Microbiology · 2026
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  10. Inhibited and Retarded Behavior by CaMaterials (Basel, Switzerland) · 2023
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Neerja M ZambareDepartment of Chemical and Biological Engineering, Montana State University, Bozeman, MT, 59717, USA.
Nada Y NaserDepartment of Chemical and Biological Engineering, Montana State University, Bozeman, MT, 59717, USA.
Robin GerlachDepartment of Chemical and Biological Engineering, Montana State University, Bozeman, MT, 59717, USA. robin_g@montana.edu.
Connie B ChangDepartment of Chemical and Biological Engineering, Montana State University, Bozeman, MT, 59717, USA. connie.chang@montana.edu.
Montana State University · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Microbe-mineral interactions are ubiquitous and can facilitate major biogeochemical reactions that drive dynamic Earth processes such as rock formation. One example is microbially induced calcium carbonate precipitation (MICP) in which microbial activity leads to the formation of calcium carbonate precipitates. A majority of MICP studies have been conducted at the mesoscale but fundamental questions persist regarding the mechanisms of cell encapsulation and mineral polymorphism. Here, we are the first to investigate and characterize precipitates on the microscale formed by MICP starting from single ureolytic E. coli MJK2 cells in 25 µm diameter drops. Mineral precipitation was observed over time and cells surrounded by calcium carbonate precipitates were observed under hydrated conditions. Using Raman microspectroscopy, amorphous calcium carbonate (ACC) was observed first in the drops, followed by vaterite formation. ACC and vaterite remained stable for up to 4 days, possibly due to the presence of organics. The vaterite precipitates exhibited a dense interior structure with a grainy exterior when examined using electron microscopy. Autofluorescence of these precipitates was observed possibly indicating the development of a calcite phase. The developed approach provides an avenue for future investigations surrounding fundamental processes such as precipitate nucleation on bacteria, microbe-mineral interactions, and polymorph transitions.

Indexed as

Calcium CarbonateChemical PrecipitationEscherichia coliMicrofluidicsMicroscopy, ConfocalMicroscopy, Electron, ScanningMicroscopy, Electron, TransmissionMicroscopy, FluorescenceMineralsNanoparticlesSpectrum Analysis, RamanCalcium CarbonateMinerals

Identifiers

PMID33067478
PMCPMC7568533
OpenAlexW3093085155

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.