Evidence map›Paper›PMID 33066813›Full record

ArticleBiological research2020

Evaluating the clinical significance of SHMT2 and its co-expressed gene in human kidney cancer.

Huan Wang, Tie Chong, Bo-Yong Li, Xiao-San Chen, Wen-Bo Zhen

Abstract read
In one paragraph

Article in Biological research, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

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3 · Its place in the literature

Who cites it

14 citing papers in PubMed.

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  9. SHMT2 Induces Stemness and Progression of Head and Neck Cancer.International journal of molecular sciences · 2022
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Huan WangDepartment of Urology, Second Affiliated Hospital of Medical School, Xi'an Jiaotong University, Xi'an, Shaanxi, 710061, P.R. China.
Tie ChongDepartment of Urology, Second Affiliated Hospital of Medical School, Xi'an Jiaotong University, Xi'an, Shaanxi, 710061, P.R. China. chongtie001@hotmail.com.
Bo-Yong LiUrology Department, The First Hospital of Yueyang City, Yueyang City, Hunan Province, 414000, China.
Xiao-San ChenUrology Department, The First Hospital of Yueyang City, Yueyang City, Hunan Province, 414000, China.
Wen-Bo ZhenUrology Department, The First Hospital of Yueyang City, Yueyang City, Hunan Province, 414000, China.

Funding

Health and Family Planning Commission of Hunan Province B2017233
6 · The paper itself

Abstract

backgroundKidney cancer is one of the most common cancers in the world. It is necessary to clarify its underlying mechanism and find its prognostic biomarkers. Current studies showed that SHMT2 may be participated in several kinds of cancer.

methodsOur studies investigated the expression of SHMT2 in kidney cancer by Oncomine, Human Protein Atlas database and ULCAN database. Meanwhile, we found its co-expression gene by cBioPortal online tool and validated their relationship in A498 and ACHN cells by cell transfection, western blot and qRT-PCR. Besides these, we also explored their prognostic values via the Kaplan-Meier plotter database in different types of kidney cancer patients.

resultsSHMT2 was found to be increased in 7 kidney cancer datasets, compared to normal renal tissues. For the cancer stages, ages and races, there existed significant difference in the expression of SHMT2 among different groups by mining of the UALCAN database. High SHMT2 expression is associated with poor overall survival in patients with kidney cancer. Among all co-expressed genes, NDUFA4L2 and SHMT2 had a high co-expression efficient. SHMT2 overexpression led to the increased expression of NDUFA4L2 at both mRNA and protein levels. Like SHMT2, overexpressed NDUFA4L2 also was associated with worse overall survival in patients with kidney cancer.

conclusionBased on above results, overexpressed SHMT2 and its co-expressed gene NDUFA4L2 were all correlated with the prognosis in kidney cancer. The present study might be benefit for better understanding the clinical significance of SHMT2 and provided a potential therapeutic target for kidney cancer in future.

Indexed as

Kidney NeoplasmsBiomarkers, TumorElectron Transport Complex IGene Expression Regulation, NeoplasticGlycine HydroxymethyltransferaseHumansNeoplasm StagingRNA, MessengerBiomarkers, TumorElectron Transport Complex IGlycine HydroxymethyltransferaseNDUFA4L2 protein, humanRNA, MessengerSHMT protein, humanBioinformatic analysisKidney cancerNDUFA4L2PrognosisSHMT2

Identifiers

PMID33066813
PMCPMC7566128

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.