Evidence map›Paper›PMID 33060678›Full record

ArticleScientific reports2020

Crystal structure and site-directed mutagenesis of circular bacteriocin plantacyclin B21AG reveals cationic and aromatic residues important for antimicrobial activity.

Mian-Chee Gor, Ben Vezina, Róisín M McMahon, Gordon J King, Santosh Panjikar, Bernd H A Rehm, Jennifer L Martin, Andrew T Smith

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
1.3field-weighted citation impact, top 20% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 14 citations in OpenAlex.

  1. Article
  2. Production of Pumilarin and a Novel Circular Bacteriocin, Altitudin A, byInternational journal of molecular sciences · 2024
    Article
  3. Article
  4. Review
  5. Article
  6. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 5 institutions in 1 country.

Mian-Chee GorGriffith Institute for Drug Discovery, Griffith University, Don Young Road, Nathan, QLD, 4111, Australia.
Ben VezinaGriffith Institute for Drug Discovery, Griffith University, Don Young Road, Nathan, QLD, 4111, Australia.
Róisín M McMahonGriffith Institute for Drug Discovery, Griffith University, Don Young Road, Nathan, QLD, 4111, Australia.
Gordon J KingFaculty of Science, University of Queensland, Brisbane, QLD, Australia.
Santosh PanjikarAustralian Synchrotron, ANSTO, Clayton, VIC, Australia.
Bernd H A RehmGriffith Institute for Drug Discovery, Griffith University, Don Young Road, Nathan, QLD, 4111, Australia.
Jennifer L MartinGriffith Institute for Drug Discovery, Griffith University, Don Young Road, Nathan, QLD, 4111, Australia.
Andrew T SmithGriffith Institute for Drug Discovery, Griffith University, Don Young Road, Nathan, QLD, 4111, Australia. andrew.smith@griffith.edu.au.
Griffith University · AUAustralian Synchrotron · AURMIT University · AUUniversity of Queensland · AUUniversity of Wollongong · AU

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Plantacyclin B21AG is a circular bacteriocin produced by Lactiplantibacillus plantarum B21 which displays antimicrobial activity against various Gram-positive bacteria including foodborne pathogens, Listeria monocytogenes and Clostridium perfringens. It is a 58-amino acid cyclised antimicrobial peptide, with the N and C termini covalently linked together. The circular peptide backbone contributes to remarkable stability, conferring partial proteolytic resistance and structural integrity under a wide temperature and pH range. Here, we report the first crystal structure of a circular bacteriocin from a food grade Lactobacillus. The protein was crystallised using the hanging drop vapour diffusion method and the structure solved to a resolution of 1.8 Å. Sequence alignment against 18 previously characterised circular bacteriocins revealed the presence of conserved charged and aromatic residues. Alanine substitution mutagenesis validated the importance of these residues. Minimum inhibitory concentration analysis of these Ala mutants showed that Phe

Indexed as

Amino Acid SequenceAnti-Infective AgentsBacteriocinsCrystallography, X-RayMicrobial Sensitivity TestsMutagenesis, Site-DirectedProtein ConformationSpectrometry, Mass, Matrix-Assisted Laser Desorption-IonizationAnti-Infective AgentsBacteriocins

Identifiers

PMID33060678
PMCPMC7562740
OpenAlexW3093340755

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.