Evidence map›Paper›PMID 33060580›Full record

ArticleNature communications2020

DOT1L-mediated murine neuronal differentiation associates with H3K79me2 accumulation and preserves SOX2-enhancer accessibility.

Francesco Ferrari, Laura Arrigoni, Henriette Franz, Annalisa Izzo, Ludmila Butenko, Eirini Trompouki, Tanja Vogel, Thomas Manke

Open access · goldAbstract read
In one paragraph

Article in Nature communications, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 32 papers.

0numbers the graph read from it
0cells of the map it votes in
32citing papers in PubMed
2.2field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

32 citing papers in PubMed, 46 citations in OpenAlex.

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  14. Epigenetic control and manipulation of neuronal maturation timing.Current opinion in genetics & development · 2024
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 2 institutions in 1 country.

Francesco FerrariMax Planck Institute of Immunobiology and Epigenetics, Freiburg, Germany.
Laura ArrigoniMax Planck Institute of Immunobiology and Epigenetics, Freiburg, Germany.ORCID 0000-0002-3626-4468
Henriette FranzInstitute of Anatomy and Cell Biology, Department of Molecular Embryology, Faculty of Medicine, University of Freiburg, Freiburg, Germany.ORCID 0000-0001-9358-7442
Annalisa IzzoInstitute of Anatomy and Cell Biology, Department of Molecular Embryology, Faculty of Medicine, University of Freiburg, Freiburg, Germany.
Ludmila ButenkoInstitute of Anatomy and Cell Biology, Department of Molecular Embryology, Faculty of Medicine, University of Freiburg, Freiburg, Germany.
Eirini TrompoukiMax Planck Institute of Immunobiology and Epigenetics, Freiburg, Germany.ORCID 0000-0002-7242-8810
Tanja VogelInstitute of Anatomy and Cell Biology, Department of Molecular Embryology, Faculty of Medicine, University of Freiburg, Freiburg, Germany. tanja.vogel@anat.uni-freiburg.de.ORCID 0000-0002-0602-9133
Thomas MankeMax Planck Institute of Immunobiology and Epigenetics, Freiburg, Germany. manke@ie-freiburg.mpg.de.ORCID 0000-0003-3702-0868
University of Freiburg · DEMax Planck Institute of Immunobiology and Epigenetics · DE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

During neuronal differentiation, the transcriptional profile and the epigenetic context of neural committed cells is subject to significant rearrangements, but a systematic quantification of global histone modification changes is still missing. Here, we show that H3K79me2 increases and H3K27ac decreases globally during in-vitro neuronal differentiation of murine embryonic stem cells. DOT1L mediates all three degrees of methylation of H3K79 and its enzymatic activity is critical to modulate cellular differentiation and reprogramming. In this context, we find that inhibition of DOT1L in neural progenitor cells biases the transcriptional state towards neuronal differentiation, resulting in transcriptional upregulation of genes marked with H3K27me3 on the promoter region. We further show that DOT1L inhibition affects accessibility of SOX2-bound enhancers and impairs SOX2 binding in neural progenitors. Our work provides evidence that DOT1L activity gates differentiation of progenitors by allowing SOX2-dependent transcription of stemness programs.

Indexed as

AnimalsCarrier ProteinsCell DifferentiationChromatinEmbryonic Stem CellsGene Expression Regulation, DevelopmentalHistone-Lysine N-MethyltransferaseHistonesMethylationMiceNeural Stem CellsNeuronsProtein Processing, Post-TranslationalSOXB1 Transcription FactorsCarrier ProteinsChromatinDot1l protein, mouseHistone-Lysine N-MethyltransferaseHistonesSox2 protein, mouseSOXB1 Transcription Factors

Identifiers

PMID33060580
PMCPMC7562744
OpenAlexW3093263242

What OpenQuestion holds

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LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.