Evidence map›Paper›PMID 33059738›Full record

ArticleSkeletal muscle2020

A novel chemical-combination screen in zebrafish identifies epigenetic small molecule candidates for the treatment of Duchenne muscular dystrophy.

Gist H Farr, Melanie Morris, Arianna Gomez, Thao Pham, Elisabeth Kilroy, Elizabeth U Parker, Shery Said, Clarissa Henry, Lisa Maves

Open access · goldAbstract read
In one paragraph

Article in Skeletal muscle, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 26 papers.

0numbers the graph read from it
0cells of the map it votes in
26citing papers in PubMed
1.4field-weighted citation impact, top 18% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

26 citing papers in PubMed, 36 citations in OpenAlex.

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  13. Frontiers in pharmacology · 2024
    Article
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  16. Modeling Sarcoglycanopathy inInternational journal of molecular sciences · 2023
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 2 institutions in 1 country.

Gist H FarrCenter for Developmental Biology and Regenerative Medicine, Seattle Children's Research Institute, Seattle, WA, USA.
Melanie MorrisCenter for Developmental Biology and Regenerative Medicine, Seattle Children's Research Institute, Seattle, WA, USA.
Arianna GomezCenter for Developmental Biology and Regenerative Medicine, Seattle Children's Research Institute, Seattle, WA, USA.
Thao PhamCenter for Developmental Biology and Regenerative Medicine, Seattle Children's Research Institute, Seattle, WA, USA.
Elisabeth KilroyGraduate School of Biomedical Science and Engineering, University of Maine, Orono, ME, USA.
Elizabeth U ParkerCenter for Developmental Biology and Regenerative Medicine, Seattle Children's Research Institute, Seattle, WA, USA.
Shery SaidCenter for Developmental Biology and Regenerative Medicine, Seattle Children's Research Institute, Seattle, WA, USA.
Clarissa HenrySchool of Biology and Ecology, University of Maine, Orono, ME, USA.
Lisa MavesCenter for Developmental Biology and Regenerative Medicine, Seattle Children's Research Institute, Seattle, WA, USA. lmaves@u.washington.edu.ORCID 0000-0002-9798-790X
Seattle Children's Hospital · USUniversity of Maine · US

Funding

Using the dmd zebrafish animal model for identifying drug combination therapies and biomarkersR21AR068536 · NIAMS · SEATTLE CHILDREN'S HOSPITAL · PI MAVES, LISA · 2015 to 2016
$490k
Regulation of muscle fiber type and resistance to muscular dystrophyR03AR065760 · NIAMS · SEATTLE CHILDREN'S HOSPITAL · PI MAVES, LISA · 2014 to 2016
$293k
NIAMS NIH HHS 1R03AR065760NIAMS NIH HHS 1R21AR068536NIAMS NIH HHS R03 AR065760NIAMS NIH HHS R21 AR068536
6 · The paper itself

Abstract

backgroundDuchenne muscular dystrophy (DMD) is a severe neuromuscular disorder and is one of the most common muscular dystrophies. There are currently few effective therapies to treat the disease, although many small-molecule approaches are being pursued. Certain histone deacetylase inhibitors (HDACi) have been shown to ameliorate DMD phenotypes in mouse and zebrafish animal models. The HDACi givinostat has shown promise for DMD in clinical trials. However, beyond a small group of HDACi, other classes of epigenetic small molecules have not been broadly and systematically studied for their benefits for DMD.

methodsWe used an established animal model for DMD, the zebrafish dmd mutant strain sapje. A commercially available library of epigenetic small molecules was used to treat embryonic-larval stages of dmd mutant zebrafish. We used a quantitative muscle birefringence assay in order to assess and compare the effects of small-molecule treatments on dmd mutant zebrafish skeletal muscle structure.

resultsWe performed a novel chemical-combination screen of a library of epigenetic compounds using the zebrafish dmd model. We identified candidate pools of epigenetic compounds that improve skeletal muscle structure in dmd mutant zebrafish. We then identified a specific combination of two HDACi compounds, oxamflatin and salermide, that ameliorated dmd mutant zebrafish skeletal muscle degeneration. We validated the effects of oxamflatin and salermide on dmd mutant zebrafish in an independent laboratory. Furthermore, we showed that the combination of oxamflatin and salermide caused increased levels of histone H4 acetylation in zebrafish larvae.

conclusionsOur results provide novel, effective methods for performing a combination of small-molecule screen in zebrafish. Our results also add to the growing evidence that epigenetic small molecules may be promising candidates for treating DMD.

Indexed as

AnimalsCells, CulturedDrug DiscoveryEpigenesis, GeneticHigh-Throughput Screening AssaysHistone Deacetylase InhibitorsHydroxamic AcidsMembrane ProteinsMuscle ProteinsMuscle, SkeletalMuscular Dystrophy, DuchenneNaphtholsPhenylpropionatesSmall Molecule LibrariesZebrafishZebrafish Proteinsdmd protein, zebrafishHistone Deacetylase InhibitorsHydroxamic AcidsMembrane ProteinsMuscle ProteinsN-(3-((2-hydroxynaphthalen-1-ylmethylene)amino)phenyl)-2-phenylpropionamideNaphtholsoxamflatinPhenylpropionatesSmall Molecule LibrariesZebrafish ProteinsChemical screenDuchenne muscular dystrophyEpigenetic small moleculesHDAC inhibitorsZebrafish

Identifiers

PMID33059738
PMCPMC7559456
OpenAlexW3092702325

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.