Evidence map›Paper›PMID 33057920›Full record

ArticleJournal of neuro-oncology2020

Detection of glioblastoma intratumor heterogeneity in radiosensitivity using patient-derived neurosphere cultures.

Joseph H McAbee, Charlotte Degorre-Kerbaul, Kristin Valdez, Astrid Wendler, Uma T Shankavaram, Colin Watts, Kevin Camphausen, Philip J Tofilon

Open access · greenAbstract read
In one paragraph

Article in Journal of neuro-oncology, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
0.8field-weighted citation impact, top 27% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 12 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 4 institutions in 2 countries.

Joseph H McAbeeRadiation Oncology Branch, NCI, Bethesda, MD, USA.
Charlotte Degorre-KerbaulRadiation Oncology Branch, NCI, Bethesda, MD, USA.
Kristin ValdezRadiation Oncology Branch, NCI, Bethesda, MD, USA.
Astrid WendlerDepartment of Clinical Neurosciences, University of Cambridge, Cambridge, UK.
Uma T ShankavaramRadiation Oncology Branch, NCI, Bethesda, MD, USA.
Colin WattsDepartment of Neurosurgery, Institute of Cancer Genome Sciences, University of Birmingham, Birmingham, UK.
Kevin CamphausenRadiation Oncology Branch, NCI, Bethesda, MD, USA.
Philip J TofilonRadiation Oncology Branch, NCI, Bethesda, MD, USA. philip.tofilon@nih.gov.ORCID http://orcid.org/0000-0003-0170-1194
Center for Cancer Research · USUniversity of Cambridge · GBNational Institutes of Health · USUniversity of Birmingham · GB

Funding

Microenvironmental regulation of glioblastoma radiosensitivityZIABC011372 · NCI · DIVISION OF BASIC SCIENCES - NCI · PI TOFILON, PHILIP · 2011 to 2025
$11.7M
Division of basic sciences, Intramural Program, National Cancer Insitute Z1ABBC011372Intramural NIH HHS ZIA BC011372
6 · The paper itself

Abstract

purposeGlioblastoma (GBM) is characterized by extensive clonal diversity suggesting the presence of tumor cells with varying degrees of treatment sensitivity. Radiotherapy is an integral part of glioblastoma treatment. Whether GBMs are comprised of spatially distinct cellular populations with uniform or varying degrees of radiosensitivity has not been established.

methodsSpatially distinct regions of three GBMs (J3, J7 and J14) were resected and unique cell lines were derived from each region. DNA from cell lines, corresponding tumor fragments, and patient blood was extracted for whole exome sequencing. Variants, clonal composition, and functional implications were compared and analyzed with superFreq and IPA. Limiting dilution assays were performed on cell lines to measure intrinsic radiosensitivity.

resultsBased on WES, cell lines generated from different regions of the same tumor were more closely correlated with their tumor of origin than the other GBMs. Variant and clonal composition comparisons showed that cell lines from distinct tumors displayed increasing levels of ITH with J3 and J14 having the lowest and highest, respectively. The radiosensitivities of the cell lines generated from the J3 tumor were similar as were those generated from the J7 tumor. However, the radiosensitivities of the 2 cell lines generated from the J14 tumor (J14T3 and J14T6) were significantly different with J14T6 being more sensitive than J14T3.

conclusionData suggest a tumor dependent ITH in radiosensitivity. The existence of ITH in radiosensitivity may impact not only the initial therapeutic response but also the effectiveness of retreatment protocols.

Indexed as

MutationRadiation ToleranceBiomarkers, TumorExome SequencingGene Expression Regulation, NeoplasticGlioblastomaHumansPrognosisTumor Cells, CulturedBiomarkers, TumorGlioblastomaIntratumor heterogeneityRadiosensitivity

Identifiers

PMID33057920
PMCPMC8942292
OpenAlexW3093301790

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.