Evidence map›Paper›PMID 33057626›Full record

ArticleJournal of the National Cancer Institute2021

A MicroRNA Expression Signature as Prognostic Marker for Oropharyngeal Squamous Cell Carcinoma.

Xinyi Liu, Ping Liu, Rebecca D Chernock, Zhenming Yang, Krystle A Lang Kuhs, James S Lewis, Jingqin Luo, Hua Li, Hiram A Gay, Wade L Thorstad and 1 more

Abstract read
In one paragraph

Article in Journal of the National Cancer Institute, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed, 1 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed, 1 synthesis or guideline pooled it.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors.

Xinyi LiuDepartment of Radiation Oncology, Washington University School of Medicine, St Louis, MO, USA.
Ping LiuDepartment of Radiation Oncology, Washington University School of Medicine, St Louis, MO, USA.
Rebecca D ChernockDepartment of Pathology and Immunology, Washington University School of Medicine, St Louis, MO, USA.
Zhenming YangDepartment of Radiation Oncology, Washington University School of Medicine, St Louis, MO, USA.
Krystle A Lang KuhsDepartment of Otolaryngology, Vanderbilt University Medical Center, Nashville, TN, USA.
James S LewisDepartment of Surgery, Washington University School of Medicine, St Louis, MO, USA.
Jingqin LuoDepartment of Pathology, Microbiology and Immunology, Vanderbilt University Medical Center, Nashville, TN, USA.ORCID 0000-0003-2759-3072
Hua LiDepartment of Radiation Oncology, Washington University School of Medicine, St Louis, MO, USA.ORCID 0000-0002-5629-2247
Hiram A GayDepartment of Radiation Oncology, Washington University School of Medicine, St Louis, MO, USA.
Wade L ThorstadDepartment of Radiation Oncology, Washington University School of Medicine, St Louis, MO, USA.ORCID 0000-0002-2757-0543
Xiaowei WangDepartment of Radiation Oncology, Washington University School of Medicine, St Louis, MO, USA.ORCID 0000-0001-9447-4685

Funding

Washington University Center for Cellular ImagingP30CA091842 · NCI · WASHINGTON UNIVERSITY · PI AIMEE S JAMES · 2001 to 2026
$128.0M
COMBINED COMPUTATIONAL AND EXPERIMENTAL ANALYSES OF GENE REGULATION BY MICRORNAS.R01GM089784 · NIGMS · WASHINGTON UNIVERSITY · PI WANG, XIAOWEI · 2010 to 2019
$2.8M
MICRORNA BIOMARKERS FOR OROPHARYNGEAL CANCERR01DE026471 · NIDCR · WASHINGTON UNIVERSITY · PI WANG, XIAOWEI · 2017 to 2021
$2.2M
Multimodal Biomarkers For Oropharyngeal CancerR01CA233873 · NCI · WASHINGTON UNIVERSITY · PI LI, HUA · 2019 to 2024
$2.0M
Human Papillomavirus-Specific Biomarkers for the Prediction of Oropharyngeal Cancer RecurrenceK07CA218247 · NCI · VANDERBILT UNIVERSITY MEDICAL CENTER · PI KUHS, KRYSTLE A. · 2018 to 2021
$594k
RADIOMICS-BASED PROGNOSTIC MODEL OF CERVICAL CANCER HABITATSR21CA223799 · NCI · WASHINGTON UNIVERSITY · PI GRIGSBY, PERRY WAYNE, LI, HUA · 2018 to 2019
$368k
NCI NIH HHS K07 CA218247NCI NIH HHS P30 CA091842NCI NIH HHS R01 CA233873NCI NIH HHS R21 CA223799NIDCR NIH HHS R01 DE026471NIGMS NIH HHS R01 GM089784
6 · The paper itself

Abstract

backgroundImproved prognostication of oropharyngeal squamous cell carcinoma (OPSCC) may facilitate individualized patient management. The goal of this study was to develop and validate a prognostic signature based on microRNA sequencing (miRNA-seq) analysis.

methodsWe collected tumor specimens for miRNA-seq analysis from OPSCC patients treated at Washington University in St Louis (n = 324) and Vanderbilt University (n = 130). OPSCC patients (n = 79) from The Cancer Genome Atlas Program were also included for independent validation. Univariate and multivariable Cox regression analyses were performed to identify miRNAs associated with disease outcomes. All statistical tests were 2-sided.

resultsBy miRNA-seq profiling analysis, we identified a 26-miRNA signature. Based on computed risk scores of the signature, we classified the patients into low- and high-risk groups. In the training cohort, the high-risk group had much shorter overall survival compared with the low-risk group (hazard ratio [HR] = 3.80, 95% confidence interval [CI] = 2.37 to 6.10, P < .001). Subgroup analysis further revealed that the signature was prognostic for HPV-positive OPSCCs (HR = 3.07, 95% CI = 1.65 to 5.71, P < .001). Multivariable analysis indicated that the signature was independent of common clinicopathologic factors for OPSCCs. Importantly, the miRNA signature was a statistically significant predictor of overall survival in independent validation cohorts (The Cancer Genome Atlas Program cohort: HR = 6.05, 95% CI = 2.10 to 17.37, P < .001; Vanderbilt cohort: HR = 7.98, 95% CI = 3.99 to 15.97, P < .001; Vanderbilt HPV-positive cohort: HR = 8.71, 95% CI = 2.70 to 28.14, P < .001).

conclusionsThe miRNA signature is a robust and independent prognostic tool for risk stratification of OPSCCs including HPV-positive OPSCCs.

Indexed as

Head and Neck NeoplasmsMicroRNAsOropharyngeal NeoplasmsBiomarkers, TumorHumansPrognosisProportional Hazards ModelsSquamous Cell Carcinoma of Head and NeckBiomarkers, TumorMicroRNAs

Identifiers

PMID33057626
PMCPMC8168274

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.