Evidence map›Paper›PMID 33055253›Full record

ArticleJournal of virology2020

Structural and Functional Characterization of Host FHL1 Protein Interaction with Hypervariable Domain of Chikungunya Virus nsP3 Protein.

Tetyana Lukash, Tatiana Agback, Francisco Dominguez, Nikita Shiliaev, Chetan Meshram, Elena I Frolova, Peter Agback, Ilya Frolov

Open access · greenAbstract read
In one paragraph

Article in Journal of virology, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
2.7field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed, 20 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 2 institutions in 2 countries.

Tetyana LukashDepartment of Microbiology, University of Alabama at Birmingham, Birmingham, Alabama, USA.
Tatiana AgbackDepartment of Molecular Sciences, Swedish University of Agricultural Sciences, Uppsala, Sweden.
Francisco DominguezDepartment of Microbiology, University of Alabama at Birmingham, Birmingham, Alabama, USA.
Nikita ShiliaevDepartment of Microbiology, University of Alabama at Birmingham, Birmingham, Alabama, USA.
Chetan MeshramDepartment of Microbiology, University of Alabama at Birmingham, Birmingham, Alabama, USA.
Elena I FrolovaDepartment of Microbiology, University of Alabama at Birmingham, Birmingham, Alabama, USA.ORCID 0000-0001-6523-9336
Peter AgbackDepartment of Molecular Sciences, Swedish University of Agricultural Sciences, Uppsala, Sweden peter.agback@slu.se ivfrolov@uab.edu.
Ilya FrolovDepartment of Microbiology, University of Alabama at Birmingham, Birmingham, Alabama, USA peter.agback@slu.se ivfrolov@uab.edu.ORCID 0000-0002-8548-2517
University of Alabama at Birmingham · USSwedish University of Agricultural Sciences · SE

Funding

Mechanistic role of ns2 protein in evasion of innate immune response by alphavirusesR01AI133159 · NIAID · UNIVERSITY OF ALABAMA AT BIRMINGHAM · PI FROLOVA, ELENA I · 2017 to 2021
$3.0M
Alphavirus nsP3 protein: roles of intrinsically disordered region in virus replication and pathogenesisR01AI118867 · NIAID · UNIVERSITY OF ALABAMA AT BIRMINGHAM · PI FROLOVA, ELENA I · 2015 to 2019
$1.8M
Mechanistic understanding of SH3 domain-containing protein function in alphavirus replicationR21AI146969 · NIAID · UNIVERSITY OF ALABAMA AT BIRMINGHAM · PI FROLOV, ILYA V. · 2019 to 2020
$401k
NIAID NIH HHS R01 AI118867NIAID NIH HHS R01 AI133159NIAID NIH HHS R21 AI146969
6 · The paper itself

Abstract

Decades of insufficient control have resulted in unprecedented spread of chikungunya virus (CHIKV) around the globe, and millions have suffered from the highly debilitating disease. Nevertheless, the current understanding of CHIKV-host interactions and adaptability of the virus to replication in mosquitoes and mammalian hosts is still elusive. Our new study shows that four-and-a-half LIM domain protein (FHL1) is one of the host factors that interact with the hypervariable domain (HVD) of CHIKV nsP3. Unlike G3BPs, FHL1 is not a prerequisite of CHIKV replication, and many commonly used cell lines do not express FHL1. However, its expression has a detectable stimulatory effect(s) on CHIKV replication, and

Indexed as

Adaptor Proteins, Signal TransducingAllosteric SiteAnimalsBinding SitesCell LineChikungunya virusCytoskeletal ProteinsHost-Pathogen InteractionsHumansIntracellular Signaling Peptides and ProteinsLIM Domain ProteinsLIM-Homeodomain ProteinsMuscle ProteinsMutationProtein BindingProtein DomainsAdaptor Proteins, Signal TransducingCD2-associated proteinCytoskeletal ProteinsFHL1 protein, humanFHL2 protein, humanFHL3 protein, humanIntracellular Signaling Peptides and ProteinsLIM Domain ProteinsLIM-Homeodomain ProteinsMuscle Proteinsnsp3 protein, alphavirusTranscription FactorsViral Nonstructural ProteinsalphavirusesCD2APchikungunya virusFHL1FHL2FHL3intrinsically disordered proteinsnsP3nuclear magnetic resonanceviral replication

Identifiers

PMID33055253
PMCPMC7737738
OpenAlexW3092691677

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.