Evidence map›Paper›PMID 33054824›Full record

ArticleVirology journal2020

Human pegivirus (HPgV, GBV-C) RNA in volunteer blood donors from a public hemotherapy service in Northern Brazil.

Aniel de Sarom Negrão Silva, Clayton Pereira Silva, Rafael Ribeiro Barata, Pedro Victor Reis da Silva, Patrícia Danin Jordão Monteiro, Letícia Lamarão, Rommel Mário Rodríguez Burbano, Márcio Roberto Teixeira Nunes, Patrícia Danielle Lima de Lima

Open access · goldAbstract read
In one paragraph

Article in Virology journal, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
2.2field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 16 citations in OpenAlex.

  1. Observational
  2. Letter to the editor: Absence of cross-reactivity of the cobas WNV assay with human pegiviruses.Euro surveillance : bulletin Europeen sur les maladies transmissibles = European communicable disease bulletin · 2025
    Article
  3. Molecular characterization and frequency of human pegivirus type 1 (HPgV-1) in kidney transplant recipients from Central-West Brazil.Brazilian journal of microbiology : [publication of the Brazilian Society for Microbiology] · 2024
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 3 institutions in 1 country.

Aniel de Sarom Negrão SilvaCenter for Life Science and Health, Pará State University, Travessa. Perebebuí, 2623, Marco, Belém, Pará, 66087-662, Brazil. anielsilva@hotmail.com.ORCID 0000-0003-1463-4453
Clayton Pereira SilvaEvandro Chagas Institute, Rodovia BR-316, km 7 s/n, Levilândia, Ananindeua , Pará, 67030-000, Brazil.
Rafael Ribeiro BarataEvandro Chagas Institute, Rodovia BR-316, km 7 s/n, Levilândia, Ananindeua , Pará, 67030-000, Brazil.
Pedro Victor Reis da SilvaCenter for Life Science and Health, Pará State University, Travessa. Perebebuí, 2623, Marco, Belém, Pará, 66087-662, Brazil.
Patrícia Danin Jordão MonteiroFoundation Center for Hemotherapy and Hematology of Pará (HEMOPA Foundation), Travessa Padre Eutíquio, 2109, Batista Campos, Belém, Pará, 66033-000, Brazil.
Letícia LamarãoFoundation Center for Hemotherapy and Hematology of Pará (HEMOPA Foundation), Travessa Padre Eutíquio, 2109, Batista Campos, Belém, Pará, 66033-000, Brazil.
Rommel Mário Rodríguez BurbanoOphir Loyola Hospital, Av. Governador Magalhães Barata, 992, São Brás, Belém , Pará, 66063-240, Brazil.
Márcio Roberto Teixeira NunesEvandro Chagas Institute, Rodovia BR-316, km 7 s/n, Levilândia, Ananindeua , Pará, 67030-000, Brazil.
Patrícia Danielle Lima de LimaCenter for Life Science and Health, Pará State University, Travessa. Perebebuí, 2623, Marco, Belém, Pará, 66087-662, Brazil.
Instituto Evandro Chagas · BRUniversidade do Estado do Pará · BRFundação Hemopa · BR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundHuman pegivirus (HPgV)-formerly known as GBV-C-is a member of the Flaviviridae family and belongs to the species Pegivirus C. It is a non-pathogenic virus and is transmitted among humans mainly through the exposure to contaminated blood and is often associated with human immunodeficiency virus (HIV) infection, among other viruses. This study aimed to determine the prevalence of HPgV viremia, its association with HIV and clinical epidemiological factors, as well as the full-length sequencing and genome characterization of HPgV recovered from blood donors of the HEMOPA Foundation in Belém-PA-Brazil.

methodsPlasma samples were obtained from 459 donors, tested for the presence of HPgV RNA by the RT-qPCR. From these, a total of 26 RT-qPCR positive samples were submitted to the NGS sequencing approach in order to obtain the full genome. Genome characterization and phylogenetic analysis were conducted.

resultsThe prevalence of HPgV was 12.42%. We observed the highest prevalences among donors aged between 18 and 30 years old (16.5%), with brown skin color (13.2%) and men (15.8%). The newly diagnosed HIV-1 prevalence was 26.67%. The HPgV genotype 2 (2a and 2b) was identified. No data on viral load value was found to corroborate the protective effect of HPgV on HIV evolution.

conclusionsThis study provided information regarding the HPgV infection among blood donors from HEMOPA Foundation. Furthermore, we genetically characterized the HPgV circulating strains and described by the first time nearly complete genomes of genotype 2 in Brazilian Amazon.

Indexed as

Blood DonorsAdolescentAdultBrazilCross-Sectional StudiesFemaleFlaviviridae InfectionsGB virus CGenome, ViralGenotypeHIV InfectionsHumansMaleMiddle AgedPegivirusPhylogenyRNA, ViralBlood donorsGenomeHIV coinfectionPegivirusPrevalence

Identifiers

PMID33054824
PMCPMC7556973
OpenAlexW3093060946

What OpenQuestion holds

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LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.