Evidence map›Paper›PMID 33054133›Full record

ArticleHaematologica2021

Untargeted metabolic profiling in dried blood spots identifies disease fingerprint for pyruvate kinase deficiency.

Birgit Van Dooijeweert, Melissa H Broeks, Nanda M Verhoeven-Duif, Eduard J Van Beers, Edward E S Nieuwenhuis, Wouter W Van Solinge, Marije Bartels, Judith J Jans, Richard Van Wijk

Open access · goldAbstract read
In one paragraph

Article in Haematologica, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
1.9field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 22 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 2 institutions in 1 country.

Birgit Van DooijeweertCentral Diagnostic Laboratory-Research, University Medical Center Utrecht, Utrecht, The Netherlands.; Department of Pediatric Hematology, University Medical Center Utrecht, Utrecht. b.vandooijeweert-3@umcutrecht.nl.
Melissa H BroeksSection Metabolic Diagnostics, Department of Genetics, University Medical Center Utrecht, Utrecht.
Nanda M Verhoeven-DuifSection Metabolic Diagnostics, Department of Genetics, University Medical Center Utrecht, Utrecht.
Eduard J Van BeersVan Creveldkliniek, University Medical Center Utrecht, Utrecht.
Edward E S NieuwenhuisDepartment of Pediatric Hematology, University Medical Center Utrecht, Utrecht.
Wouter W Van SolingeCentral Diagnostic Laboratory-Research, University Medical Center Utrecht, Utrecht.
Marije BartelsDepartment of Pediatric Hematology, University Medical Center Utrecht, Utrecht, The Netherlands.; Van Creveldkliniek, University Medical Center Utrecht, Utrecht.
Judith J JansSection Metabolic Diagnostics, Department of Genetics, University Medical Center Utrecht, Utrecht.
Richard Van WijkCentral Diagnostic Laboratory-Research, University Medical Center Utrecht, Utrecht.
University Medical Center Utrecht · NLUtrecht University · NL

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The diagnostic evaluation and clinical characterization of rare hereditary anemia (RHA) is to date still challenging. In particular, there is little knowledge on the broad metabolic impact of many of the molecular defects underlying RHA. In this study we explored the potential of untargeted metabolomics to diagnose a relatively common type of RHA: Pyruvate Kinase Deficiency (PKD). In total, 1903 unique metabolite features were identified in dried blood spot samples from 16 PKD patients and 32 healthy controls. A metabolic fingerprint was identified using a machine learning algorithm, and subsequently a binary classification model was designed. The model showed high performance characteristics (AUC 0.990, 95%CI 0.981-0.999) and an accurate class assignment was achieved for all newly added control (13) and patient samples (6), with the exception of one patient (accuracy 94%). Important metabolites in the metabolic fingerprint included glycolytic intermediates, polyamines and several acyl carnitines. In general, the application of untargeted metabolomics in dried blood spots is a novel functional tool that holds promise for diagnostic stratification and studies on disease pathophysiology in RHA.

Indexed as

Anemia, Hemolytic, Congenital NonspherocyticPyruvate Metabolism, Inborn ErrorsDried Blood Spot TestingHumansMetabolomicsPyruvate KinasePyruvate Kinase

Identifiers

PMID33054133
PMCPMC8485668
OpenAlexW3084821052

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.