Evidence map›Paper›PMID 33053735›Full record

ArticleMolecules (Basel, Switzerland)2020

Development of an LC-MS Targeted Metabolomics Methodology to Study Proline Metabolism in Mammalian Cell Cultures.

Agnieszka Klupczynska, Magdalena Misiura, Wojciech Miltyk, Ilona Oscilowska, Jerzy Palka, Zenon J Kokot, Jan Matysiak

Open access · goldAbstract read
In one paragraph

Article in Molecules (Basel, Switzerland), 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
0.8field-weighted citation impact, top 28% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed, 19 citations in OpenAlex.

  1. Article
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  4. Review
  5. Analysis types and quantification methods applied in UHPLC-MS metabolomics research: a tutorial.Metabolomics : Official journal of the Metabolomic Society · 2024
    Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 3 institutions in 1 country.

Agnieszka KlupczynskaDepartment of Inorganic and Analytical Chemistry, Poznan University of Medical Sciences, 60-780 Poznan, Poland.ORCID 0000-0002-5028-1408
Magdalena MisiuraDepartment of Analysis and Bioanalysis of Medicines, Medical University of Bialystok, 15-222 Bialystok, Poland.ORCID 0000-0002-8641-2991
Wojciech MiltykDepartment of Analysis and Bioanalysis of Medicines, Medical University of Bialystok, 15-222 Bialystok, Poland.ORCID 0000-0001-5150-6093
Ilona OscilowskaDepartment of Medicinal Chemistry, Medical University of Bialystok, 15-222 Bialystok, Poland.ORCID 0000-0002-7934-6973
Jerzy PalkaDepartment of Medicinal Chemistry, Medical University of Bialystok, 15-222 Bialystok, Poland.ORCID 0000-0002-8476-2023
Zenon J KokotFaculty of Health Sciences, State University of Applied Sciences in Kalisz, 62-800 Kalisz, Poland.ORCID 0000-0003-4950-9759
Jan MatysiakDepartment of Inorganic and Analytical Chemistry, Poznan University of Medical Sciences, 60-780 Poznan, Poland.ORCID 0000-0002-9993-1504
Medical University of Białystok · PLPoznan University of Medical Sciences · PLUniwersytet Kaliski im. Prezydenta Stanisława Wojciechowskiego · PL

Funding

European Union funds, POWER 2014-2020 POWR.03.02.00-00-I051/16Fundacja na rzecz Nauki Polskiej START 2019Narodowe Centrum Nauki 2017/25/B/NZ7/02183Narodowe Centrum Nauki 2017/25/B/NZ7/02650
6 · The paper itself

Abstract

A growing interest in metabolomics studies of cultured cells requires development not only untargeted methods capable of fingerprinting the complete metabolite profile but also targeted methods enabling the precise and accurate determination of a selected group of metabolites. Proline metabolism affects many crucial processes at the cellular level, including collagen biosynthesis, redox balance, energetic processes as well as intracellular signaling. The study aimed to develop a robust and easy-to-use targeted metabolomics method for the determination of the intracellular level of proline and the other two amino acids closely related to proline metabolism: glutamic acid and arginine. The method employs hydrophilic interaction liquid chromatography followed by high-resolution, accurate-mass mass spectrometry for reliable detection and quantification of the target metabolites in cell lysates. The sample preparation consisted of quenching by the addition of ice-cold methanol and subsequent cell scraping into a quenching solution. The method validation showed acceptable linearity (r > 0.995), precision (%RSD < 15%), and accuracy (88.5-108.5%). Pilot research using HaCaT spontaneously immortalized human keratinocytes in a model for wound healing was performed, indicating the usefulness of the method in studies of disturbances in proline metabolism. The developed method addresses the need to determine the intracellular concentration of three key amino acids and can be used routinely in targeted mammalian cell culture metabolomics research.

Indexed as

Amino AcidsCell LineChromatography, LiquidHumansKeratinocytesMass SpectrometryMetabolomicsProlineAmino AcidsProlineamino acidscell cultureliquid chromatography-mass spectrometrymetabolomicsproline

Identifiers

PMID33053735
PMCPMC7587214
OpenAlexW3092477678

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.