Evidence map›Paper›PMID 33053332›Full record

ArticleImmunity2020

HIV-1 VRC01 Germline-Targeting Immunogens Select Distinct Epitope-Specific B Cell Receptors.

Yu-Ru Lin, K Rachael Parks, Connor Weidle, Anika S Naidu, Arineh Khechaduri, Andrew O Riker, Brittany Takushi, Jung-Ho Chun, Andrew J Borst, David Veesler and 6 more

Open access · bronzeAbstract read
In one paragraph

Article in Immunity, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 31 papers.

0numbers the graph read from it
0cells of the map it votes in
31citing papers in PubMed
3.6field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

31 citing papers in PubMed, 44 citations in OpenAlex.

  1. Article
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  9. Article
  10. Status of HIV vaccine development: progress and promise.Journal of the International AIDS Society · 2025
    Article
  11. Article
  12. Article
  13. The CH1 domain influences the expression and antigen sensing of the HIV-specific CH31 IgM-BCR and IgG-BCR.Proceedings of the National Academy of Sciences of the United States of America · 2024
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

16 authors at 4 institutions in 1 country.

Yu-Ru LinFred Hutchinson Cancer Research Center, Vaccines and Infectious Diseases Division, Seattle, WA, USA.
K Rachael ParksFred Hutchinson Cancer Research Center, Vaccines and Infectious Diseases Division, Seattle, WA, USA; University of Washington, Department of Global Health, Seattle, WA, USA.
Connor WeidleFred Hutchinson Cancer Research Center, Vaccines and Infectious Diseases Division, Seattle, WA, USA.
Anika S NaiduStanford University, Department of Bioengineering, Stanford, CA, USA.
Arineh KhechaduriFred Hutchinson Cancer Research Center, Vaccines and Infectious Diseases Division, Seattle, WA, USA.
Andrew O RikerFred Hutchinson Cancer Research Center, Vaccines and Infectious Diseases Division, Seattle, WA, USA.
Brittany TakushiFred Hutchinson Cancer Research Center, Vaccines and Infectious Diseases Division, Seattle, WA, USA.
Jung-Ho ChunUniversity of Washington, Department of Biochemistry, Seattle, WA, USA.
Andrew J BorstUniversity of Washington, Department of Biochemistry, Seattle, WA, USA.
David VeeslerUniversity of Washington, Department of Biochemistry, Seattle, WA, USA.
Andrew StuartFred Hutchinson Cancer Research Center, Vaccines and Infectious Diseases Division, Seattle, WA, USA.
Parul AgrawalFred Hutchinson Cancer Research Center, Vaccines and Infectious Diseases Division, Seattle, WA, USA.
Matthew GrayFred Hutchinson Cancer Research Center, Vaccines and Infectious Diseases Division, Seattle, WA, USA.
Marie PanceraFred Hutchinson Cancer Research Center, Vaccines and Infectious Diseases Division, Seattle, WA, USA; Vaccine Research Center, National Institutes of Allergy and Infectious Diseases, National Institute of Health, Bethesda, MD, USA. Electronic address: mpancera@fredhutch.org.
Po-Ssu HuangStanford University, Department of Bioengineering, Stanford, CA, USA. Electronic address: possu@stanford.edu.
Leonidas StamatatosFred Hutchinson Cancer Research Center, Vaccines and Infectious Diseases Division, Seattle, WA, USA; University of Washington, Department of Global Health, Seattle, WA, USA. Electronic address: lstamata@fredhutch.org.
Fred Hutch Cancer Center · USUniversity of Washington · USStanford University · USNational Institute of Allergy and Infectious Diseases · US

Funding

Recombinant HIV-1 Env glycoprotein immunogens and antibodies production and structural characterizationP01AI138212 · NIAID · FRED HUTCHINSON CANCER RESEARCH CENTER · PI NUSSENZWEIG, MICHEL C · 2019 to 2023
$9.2M
Defining BCR evolution during immunizationR01AI104384 · NIAID · SEATTLE BIOMEDICAL RESEARCH INSTITUTE · PI STAMATATOS, LEONIDAS · 2013 to 2021
$5.9M
Acquisition of a high resolution, high throughput cryo-electron microscopeS10OD023476 · OD · UNIVERSITY OF WASHINGTON · PI KOLLMAN, JUSTIN M · 2017 to 2017
$2.0M
NIAID NIH HHS P01 AI138212NIAID NIH HHS R01 AI104384NIH HHS S10 OD023476
6 · The paper itself

Abstract

Activating precursor B cell receptors of HIV-1 broadly neutralizing antibodies requires specifically designed immunogens. Here, we compared the abilities of three such germline-targeting immunogens against the VRC01-class receptors to activate the targeted B cells in transgenic mice expressing the germline VH of the VRC01 antibody but diverse mouse light chains. Immunogen-specific VRC01-like B cells were isolated at different time points after immunization, their VH and VL genes were sequenced, and the corresponding antibodies characterized. VRC01 B cell sub-populations with distinct cross-reactivity properties were activated by each immunogen, and these differences correlated with distinct biophysical and biochemical features of the germline-targeting immunogens. Our study indicates that the design of effective immunogens to activate B cell receptors leading to protective HIV-1 antibodies will require a better understanding of how the biophysical properties of the epitope and its surrounding surface on the germline-targeting immunogen influence its interaction with the available receptor variants in vivo.

Indexed as

Amino Acid SequenceAnimalsAntibodies, MonoclonalAntibodies, NeutralizingAntigensB-LymphocytesBroadly Neutralizing AntibodiesCell LineEpitopes, B-LymphocyteFemaleGerm CellsHEK293 CellsHIV-1HIV AntibodiesHIV InfectionsHumansAntibodies, MonoclonalAntibodies, NeutralizingAntigensBroadly Neutralizing AntibodiesEpitopes, B-LymphocyteHIV AntibodiesReceptors, Antigen, B-CellVRC01 monoclonal antibody426cantibody affinityB cell receptorseOD-GT8epitope exposuregermline antibodyHIVVRC01- antibodies

Identifiers

PMID33053332
PMCPMC7735217
OpenAlexW3093233531

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.