Evidence map›Paper›PMID 33051672›Full record

ArticleBioinformatics (Oxford, England)2021

PhyloWGA: chromosome-aware phylogenetic interrogation of whole genome alignments.

Richard H Adams, Todd A Castoe, Michael DeGiorgio

Abstract read
In one paragraph

Article in Bioinformatics (Oxford, England), 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Likelihood-Based Tests of Species Tree Hypotheses.Molecular biology and evolution · 2023
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors.

Richard H AdamsDepartment of Computer and Electrical Engineering and Computer Science, Florida Atlantic University, Boca Raton, FL 33431, USA.
Todd A CastoeDepartment of Biology, University of Texas at Arlington, Arlington, TX 76019, USA.
Michael DeGiorgioDepartment of Computer and Electrical Engineering and Computer Science, Florida Atlantic University, Boca Raton, FL 33431, USA.

Funding

Identifying complex modes of adaptation from population-genomic dataR35GM128590 · NIGMS · PENNSYLVANIA STATE UNIVERSITY, THE · PI Michael DeGiorgio · 2018 to 2026
$2.8M
National Science Foundation DEB-1753489NIGMS NIH HHS R35 GM128590
6 · The paper itself

Abstract

summaryHere, we present PhyloWGA, an open source R package for conducting phylogenetic analysis and investigation of whole genome data. AVAILABILITYAND IMPLEMENTATION: Available at Github (https://github.com/radamsRHA/PhyloWGA). SUPPLEMENTARY INFORMATION: Supplementary data are available at Bioinformatics online.

Indexed as

GenomeSoftwareChromosomesPhylogeny

Identifiers

PMID33051672
PMCPMC8317108

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.