ArticleScientific data2020
Viral metagenomes of Lake Soyang, the largest freshwater lake in South Korea.
Article in Scientific data, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.
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13 citing papers in PubMed, 30 citations in OpenAlex.
- Salinity-driven shifts in estuarine viral community composition and diversity near the Shenzhen coast.Applied and environmental microbiology · 2025Article
- Microbial metagenomes from Lake Soyang, the largest freshwater reservoir in South Korea.Scientific data · 2025Article
- Contrasting defense strategies of oligotrophs and copiotrophs revealed by single-cell-resolved virus-host pairing of freshwater bacteria.ISME communications · 2025Article
- Virus-prokaryote infection pairs associated with prokaryotic production in a freshwater lake.mSystems · 2024Article
- Metagenome sequencing and recovery of 444 metagenome-assembled genomes from the biofloc aquaculture system.Scientific data · 2023Article
- Genomic Analysis and Taxonomic Characterization of Seven Bacteriophage Genomes Metagenomic-Assembled from the Dishui Lake.Viruses · 2023Article
- The Viral Fraction Metatranscriptomes of Lake Baikal.Microorganisms · 2022Article
- Accurate identification of bacteriophages from metagenomic data using Transformer.Briefings in bioinformatics · 2022Article
- Bacteriophage classification for assembled contigs using graph convolutional network.Bioinformatics (Oxford, England) · 2021Article
- Occurrence and diversity of viruses associated with cyanobacterial communities in a Brazilian freshwater reservoir.Brazilian journal of microbiology : [publication of the Brazilian Society for Microbiology] · 2021Article
- Metaviromics coupled with phage-host identification to open the viral 'black box'.Journal of microbiology (Seoul, Korea) · 2021Review
- Article
- Viral metagenomes of Lake Soyang, the largest freshwater lake in South Korea.Scientific data · 2020Article
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Authors and funding
4 authors at 1 institution in 1 country.
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Abstract
A high number of viral metagenomes have revealed countless genomes of putative bacteriophages that have not yet been identified due to limitations in bacteriophage cultures. However, most virome studies have been focused on marine or gut environments, thereby leaving the viral community structure of freshwater lakes unclear. Because the lakes located around the globe have independent ecosystems with unique characteristics, viral community structures are also distinctive but comparable. Here, we present data on viral metagenomes that were seasonally collected at a depth of 1 m from Lake Soyang, the largest freshwater reservoir in South Korea. Through shotgun metagenome sequencing using the Illumina MiSeq platform, 3.08 to 5.54-Gbps of reads per virome were obtained. To predict the viral genome sequences within Lake Soyang, contigs were constructed and 648 to 1,004 putative viral contigs were obtained per sample. We expect that both viral metagenome reads and viral contigs would contribute in comparing and understanding of viral communities among different freshwater lakes depending on seasonal changes.
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