Evidence map›Paper›PMID 33050887›Full record

ArticleBMC plant biology2020

Salt-induced expression of intracellular vesicle trafficking genes, CaRab-GTP, and their association with Na

Crystal Sweetman, Gulmira Khassanova, Troy K Miller, Nicholas J Booth, Akhylbek Kurishbayev, Satyvaldy Jatayev, Narendra K Gupta, Peter Langridge, Colin L D Jenkins, Kathleen L Soole and 2 more

Open access · goldAbstract read
In one paragraph

Article in BMC plant biology, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed
3.9field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed, 25 citations in OpenAlex.

  1. Article
  2. Longer Internode with Same Cell Length:Plants (Basel, Switzerland) · 2025
    Article
  3. Article
  4. Article
  5. Review
  6. Article
  7. Article
  8. Article
  9. Plant Biology and Biotechnology: Focus on Genomics and Bioinformatics.International journal of molecular sciences · 2022
    Article
  10. Article
  11. Expression of Specific Alleles of Zinc-Finger Transcription Factors,International journal of molecular sciences · 2021
    Article
  12. Review
  13. Article
  14. International journal of molecular sciences · 2020
    Article
  15. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 4 institutions in 4 countries.

Crystal SweetmanCollege of Science and Engineering, Biological Sciences, Flinders University, Adelaide, Australia.
Gulmira KhassanovaFaculty of Agronomy, S. Seifullin Kazakh AgroTechnical University, Nur-Sultan, Kazakhstan.
Troy K MillerCollege of Science and Engineering, Biological Sciences, Flinders University, Adelaide, Australia.
Nicholas J BoothCollege of Science and Engineering, Biological Sciences, Flinders University, Adelaide, Australia.
Akhylbek KurishbayevFaculty of Agronomy, S. Seifullin Kazakh AgroTechnical University, Nur-Sultan, Kazakhstan.
Satyvaldy JatayevFaculty of Agronomy, S. Seifullin Kazakh AgroTechnical University, Nur-Sultan, Kazakhstan. satidjo@gmail.com.
Narendra K GuptaCollege of Agriculture, SKN Agriculture University, Jobner, Rajasthan, India.
Peter LangridgeWheat Initiative, Julius-Kühn-Institute, Berlin, Germany.
Colin L D JenkinsCollege of Science and Engineering, Biological Sciences, Flinders University, Adelaide, Australia.
Kathleen L SooleCollege of Science and Engineering, Biological Sciences, Flinders University, Adelaide, Australia.
David A DayCollege of Science and Engineering, Biological Sciences, Flinders University, Adelaide, Australia.
Yuri ShavrukovCollege of Science and Engineering, Biological Sciences, Flinders University, Adelaide, Australia. yuri.shavrukov@flinders.edu.au.
Flinders University · AUS.Seifullin Kazakh Agro Technical University · KZJulius Kühn-Institut · DESri Karan Narendra Agriculture University, Jobner · IN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundChickpea is an important legume and is moderately tolerant to salinity stress during the growing season. However, the level and mechanisms for salinity tolerance can vary among accessions and cultivars. A large family of CaRab-GTP genes, previously identified in chickpea, is homologous to intracellular vesicle trafficking superfamily genes that play essential roles in response to salinity stress in plants.

resultsTo determine which of the gene family members are involved in the chickpea salt response, plants from six selected chickpea accessions (Genesis 836, Hattrick, ICC12726, Rupali, Slasher and Yubileiny) were exposed to salinity stress and expression profiles resolved for the major CaRab-GTP gene clades after 5, 9 and 15 days of salt exposure. Gene clade expression profiles (using degenerate primers targeting all members of each clade) were tested for their relationship to salinity tolerance measures, namely plant biomass and Na

conclusionA coordinated network of CaRab-GTP genes, which are likely involved in intracellular trafficking, are important for the salinity stress response of chickpea plants.

Indexed as

CicerCytoplasmic VesiclesGene Expression ProfilingGenes, PlantPlant LeavesPotassiumrab GTP-Binding ProteinsSalt ToleranceSodiumSodium ChloridePotassiumrab GTP-Binding ProteinsSodiumSodium ChlorideChickpeaGene expressionRab-GTP genesSalinitySalt stressVesicle trafficking

Identifiers

PMID33050887
PMCPMC7557026
OpenAlexW3092425417

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.