Evidence map›Paper›PMID 33050709›Full record

ArticleAmerican journal of physiology. Lung cellular and molecular physiology2021

Genetic determinants of ammonia-induced acute lung injury in mice.

Kiflai Bein, Koustav Ganguly, Timothy M Martin, Vincent J Concel, Kelly A Brant, Y P Peter Di, Swapna Upadhyay, James P Fabisiak, Louis J Vuga, Naftali Kaminski and 5 more

Open access · greenAbstract read
In one paragraph

Article in American journal of physiology. Lung cellular and molecular physiology, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
0.5field-weighted citation impact, top 43% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 12 citations in OpenAlex.

  1. Trial
  2. Article
  3. Article
  4. Review
  5. Review
  6. Article
  7. Article
  8. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

15 authors at 4 institutions in 3 countries.

Kiflai BeinDepartment of Environmental and Occupational Health, Graduate School of Public Health, University of Pittsburgh, Pittsburgh, Pennsylvania.
Koustav GangulyDepartment of Environmental and Occupational Health, Graduate School of Public Health, University of Pittsburgh, Pittsburgh, Pennsylvania.
Timothy M MartinDepartment of Environmental and Occupational Health, Graduate School of Public Health, University of Pittsburgh, Pittsburgh, Pennsylvania.
Vincent J ConcelDepartment of Environmental and Occupational Health, Graduate School of Public Health, University of Pittsburgh, Pittsburgh, Pennsylvania.
Kelly A BrantDepartment of Environmental and Occupational Health, Graduate School of Public Health, University of Pittsburgh, Pittsburgh, Pennsylvania.
Y P Peter DiDepartment of Environmental and Occupational Health, Graduate School of Public Health, University of Pittsburgh, Pittsburgh, Pennsylvania.
Swapna UpadhyayDepartment of Environmental and Occupational Health, Graduate School of Public Health, University of Pittsburgh, Pittsburgh, Pennsylvania.
James P FabisiakDepartment of Environmental and Occupational Health, Graduate School of Public Health, University of Pittsburgh, Pittsburgh, Pennsylvania.ORCID 0000-0003-0283-8985
Louis J VugaDepartment of Medicine, University of Pittsburgh, Pittsburgh, Pennsylvania.
Naftali KaminskiDepartment of Medicine, University of Pittsburgh, Pittsburgh, Pennsylvania.ORCID 0000-0001-5917-4601
Emrah KostemDepartments of Computer Science and Human Genetics, University of California, Los Angeles, California.
Eleazar EskinDepartments of Computer Science and Human Genetics, University of California, Los Angeles, California.
Daniel R ProwsDivision of Human Genetics, Cincinnati Children's Hospital and Department of Pediatrics, University of Cincinnati, Cincinnati, Ohio.ORCID 0000-0003-0049-148X
Ann-Soo JangDivision of Allergy and Respiratory Medicine, Department of Internal Medicine, Soonchunhyang University Bucheon Hospital, Bucheon, South Korea.ORCID 0000-0001-5343-023X
George D LeikaufDepartment of Environmental and Occupational Health, Graduate School of Public Health, University of Pittsburgh, Pittsburgh, Pennsylvania.
University of Pittsburgh · USUniversity of California, Los Angeles · USCincinnati Children's Hospital Medical Center · USSoonchunhyang University · KR

Funding

Yale Clinical and Translational Science Award (U Component)UL1TR001863 · NCATS · YALE UNIVERSITY · PI John H. Krystal, LUCILA OHNO-MACHADO · 2016 to 2026
$102.9M
Surrogate Biomarkers for Disease Progression in IPFP50HL084932 · NHLBI · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI PILEWSKI, JOSEPH MARK · 2006 to 2010
$12.2M
Improving our mechanistic understanding of Electronic-cigarette, or vaping, product use-associated lung injuryU01ES015675 · NIEHS · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI LEIKAUF, GEORGE DOUGLAS · 2006 to 2020
$8.9M
Molecular Phenotypes within and across disease boundaries in IPF and COPDR01HL095397 · NHLBI · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI KAMINSKI, NAFTALI, SHAPIRO, STEVEN D · 2008 to 2011
$3.0M
Novel antimicrobial agents to overcome antibiotic resistant Pseudomonas and MRSA respiratory infectionR01AI133351 · NIAID · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI DI, YUANPU PETER · 2017 to 2021
$2.6M
Pathophysiological Mechanisms of Chemical-Induced Acute Lung InjuryR01ES034490 · NIEHS · UNIVERSITY OF CINCINNATI · PI LEIKAUF, GEORGE DOUGLAS · 2023 to 2025
$1.5M
Growth Factor Protection in Acute Lung InjuryR01HL077763 · NHLBI · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI LEIKAUF, GEORGE DOUGLAS · 2006 to 2009
$1.4M
Role of Metalloproteinases in Mucin Overproduction in COPDR01HL085655 · NHLBI · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI LEIKAUF, GEORGE DOUGLAS · 2008 to 2011
$1.4M
HHS | NIH | National Heart, Lung, and Blood Institute (NHBLI) HL077763HHS | NIH | National Heart, Lung, and Blood Institute (NHBLI) HL084932HHS | NIH | National Heart, Lung, and Blood Institute (NHBLI) HL085655HHS | NIH | National Heart, Lung, and Blood Institute (NHBLI) HL095397NCATS NIH HHS UL1 TR001863NHLBI NIH HHS P50 HL084932NHLBI NIH HHS R01 HL077763NHLBI NIH HHS R01 HL085655NHLBI NIH HHS R01 HL095397NIAID NIH HHS R01 AI133351NIEHS NIH HHS R01 ES034490NIEHS NIH HHS U01 ES015675
6 · The paper itself

Abstract

In this study, a genetically diverse panel of 43 mouse strains was exposed to ammonia, and genome-wide association mapping was performed employing a single-nucleotide polymorphism (SNP) assembly. Transcriptomic analysis was used to help resolve the genetic determinants of ammonia-induced acute lung injury. The encoded proteins were prioritized based on molecular function, nonsynonymous SNP within a functional domain or SNP within the promoter region that altered expression. This integrative functional approach revealed 14 candidate genes that included

Indexed as

Genetic MarkersGenetic Predisposition to DiseaseGenome-Wide Association StudyPolymorphism, Single NucleotideTranscriptomeAcute Lung InjuryAmmoniaAnimalsFemaleGene Expression RegulationHumansMiceMice, Inbred BALB CMice, Inbred CBAAmmoniaGenetic Markersacute lung injuryARDSchemical threatfunctional genomicstranscriptomics

Identifiers

PMID33050709
PMCPMC7847062
OpenAlexW3092579003

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.