Evidence map›Paper›PMID 33049995›Full record

ArticleInternational journal of molecular sciences2020

A Comparative Transcriptome Analysis, Conserved Regulatory Elements and Associated Transcription Factors Related to Accumulation of Fusariotoxins in Grain of Rye (

Khalid Mahmood, Jihad Orabi, Peter Skov Kristensen, Pernille Sarup, Lise Nistrup Jørgensen, Ahmed Jahoor

Open access · goldAbstract read
PubMed Full text at PMC Publisher
In one paragraph

Article in International journal of molecular sciences, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
0.9field-weighted citation impact, top 19% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 6 citations in OpenAlex.

  1. Review
  2. WildJournal of fungi (Basel, Switzerland) · 2023
    Article
  3. Article
  4. Linking Multi-Omics to Wheat Resistance Types toInternational journal of molecular sciences · 2022
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 2 countries.

Khalid MahmoodNordic Seed A/S: Grindsnabevej 25, 8300 Odder, Denmark.ORCID 0000-0001-8607-4518
Jihad OrabiNordic Seed A/S: Grindsnabevej 25, 8300 Odder, Denmark.ORCID 0000-0001-9641-6657
Peter Skov KristensenNordic Seed A/S: Grindsnabevej 25, 8300 Odder, Denmark.ORCID 0000-0001-6110-301X
Pernille SarupNordic Seed A/S: Grindsnabevej 25, 8300 Odder, Denmark.
Lise Nistrup JørgensenDepartment of Agroecology, Faculty of Technology, Aarhus University, Forsøgsvej 1, Flakkebjerg, DK-4200 Slagelse, Denmark.
Ahmed JahoorNordic Seed A/S: Grindsnabevej 25, 8300 Odder, Denmark.
Aarhus University · DKSwedish University of Agricultural Sciences · SE

Funding

Innovationsfonden 7039-00016B
6 · The paper itself

Abstract

Detoxification of fusariotoxin is a type V Fusarium head blight (FHB) resistance and is considered a component of type II resistance, which is related to the spread of infection within spikes. Understanding this type of resistance is vital for FHB resistance, but to date, nothing is known about candidate genes that confer this resistance in rye due to scarce genomic resources. In this study, we generated a transcriptomic resource. The molecular response was mined through a comprehensive transcriptomic analysis of two rye hybrids differing in the build-up of fusariotoxin contents in grain upon pathogen infection. Gene mining identified candidate genes and pathways contributing to the detoxification of fusariotoxins in rye. Moreover, we found

Indexed as

TranscriptomeCytochrome P-450 Enzyme SystemDisease ResistanceEdible GrainFusariosisFusariumGene Expression ProfilingGene Expression Regulation, PlantGene OntologyGlycolysisPlant DiseasesPlant ProteinsPromoter Regions, GeneticSecaleT-2 ToxinTranscription FactorsCytochrome P-450 Enzyme SystemPlant ProteinsT-2 ToxinTranscription Factorscis-regulatory elementsdisease resistanceFusarium head blightGO enrichmenthybridsryetranscriptome

Identifiers

PMID33049995
PMCPMC7582487
OpenAlexW3091974199

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.