Evidence map›Paper›PMID 33047219›Full record

ArticleTAG. Theoretical and applied genetics. Theoretische und angewandte Genetik2021

Identification and cross-validation of genetic loci conferring resistance to Septoria nodorum blotch using a German multi-founder winter wheat population.

Min Lin, Melanie Stadlmeier, Volker Mohler, Kar-Chun Tan, Andrea Ficke, James Cockram, Morten Lillemo

Open access · hybridAbstract read
In one paragraph

Article in TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
3.0field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 18 citations in OpenAlex.

  1. Article
  2. Review
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  4. Genome-wide association mapping of septoria nodorum blotch resistance in Nordic winter and spring wheat collections.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2022
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 5 institutions in 4 countries.

Min LinDepartment of Plant Sciences, Norwegian University of Life Sciences, Post Box 5003, 1432, Ås, Norway.ORCID http://orcid.org/0000-0002-9209-3819
Melanie StadlmeierBavarian State Research Center for Agriculture, Institute for Crop Science and Plant Breeding, Freising, Germany.
Volker MohlerBavarian State Research Center for Agriculture, Institute for Crop Science and Plant Breeding, Freising, Germany.ORCID http://orcid.org/0000-0001-5835-0925
Kar-Chun TanCentre for Crop and Disease Management, School of Molecular and Life Sciences, Curtin University, Bentley, WA, Australia.ORCID http://orcid.org/0000-0001-6094-823X
Andrea FickeNorwegian Institute of Bioeconomy Research, Høgskoleveien 7, 1433, Ås, Norway.ORCID http://orcid.org/0000-0002-3438-3842
James CockramJohn Bingham Laboratory, NIAB, 93 Lawrence Weaver Road, Cambridge, CB3 0LE, UK.ORCID http://orcid.org/0000-0002-1014-6463
Morten LillemoDepartment of Plant Sciences, Norwegian University of Life Sciences, Post Box 5003, 1432, Ås, Norway. morten.lillemo@nmbu.no.ORCID https://orcid.org/0000-0002-8594-8794
Bavarian State Research Center for Agriculture · DENorwegian University of Life Sciences · NOCurtin University · AUNational Institute of Agricultural Botany · GBNorwegian Institute of Bioeconomy Research · NO

Funding

Biotechnology and Biological Sciences Research Council BB/N00518X/1Deutsche Forschungsgemeinschaft HA 5798/2-1Grains Research and Development Corporation CUR00023Norges Forskningsråd NFR251894
6 · The paper itself

Abstract

key messageWe identified allelic variation at two major loci, QSnb.nmbu-2A.1 and QSnb.nmbu-5A.1, showing consistent and additive effects on SNB field resistance. Validation of QSnb.nmbu-2A.1 across genetic backgrounds further highlights its usefulness for marker-assisted selection. Septoria nodorum blotch (SNB) is a disease of wheat (Triticum aestivum and T. durum) caused by the necrotrophic fungal pathogen Parastagonospora nodorum. SNB resistance is a typical quantitative trait, controlled by multiple quantitative trait loci (QTL) of minor effect. To achieve increased plant resistance, selection for resistance alleles and/or selection against susceptibility alleles must be undertaken. Here, we performed genetic analysis of SNB resistance using an eight-founder German Multiparent Advanced Generation Inter-Cross (MAGIC) population, termed BMWpop. Field trials and greenhouse testing were conducted over three seasons in Norway, with genetic analysis identifying ten SNB resistance QTL. Of these, two QTL were identified over two seasons: QSnb.nmbu-2A.1 on chromosome 2A and QSnb.nmbu-5A.1 on chromosome 5A. The chromosome 2A BMWpop QTL co-located with a robust SNB resistance QTL recently identified in an independent eight-founder MAGIC population constructed using varieties released in the United Kingdom (UK). The validation of this SNB resistance QTL in two independent multi-founder mapping populations, regardless of the differences in genetic background and agricultural environment, highlights the value of this locus in SNB resistance breeding. The second robust QTL identified in the BMWpop, QSnb.nmbu-5A.1, was not identified in the UK MAGIC population. Combining resistance alleles at both loci resulted in additive effects on SNB resistance. Therefore, using marker assisted selection to combine resistance alleles is a promising strategy for improving SNB resistance in wheat breeding. Indeed, the multi-locus haplotypes determined in this study provide markers for efficient tracking of these beneficial alleles in future wheat genetics and breeding activities.

Indexed as

Quantitative Trait LociAllelesAscomycotaDisease ResistanceHaplotypesNorwayPhenotypePlant BreedingPlant DiseasesTriticum

Identifiers

PMID33047219
PMCPMC7813717
OpenAlexW3092323183

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.