Evidence map›Paper›PMID 33046851›Full record

ArticleNature chemical biology2021

Peroxisome compartmentalization of a toxic enzyme improves alkaloid production.

Parbir S Grewal, Jennifer A Samson, Jordan J Baker, Brian Choi, John E Dueber

Abstract read
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In one paragraph

Article in Nature chemical biology, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 55 papers.

0numbers the graph read from it
0cells of the map it votes in
55citing papers in PubMed
6.2field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

55 citing papers in PubMed, 134 citations in OpenAlex.

  1. Biological-chemical method for synthesizingSynthetic and systems biotechnology · 2026
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  11. A peroxisomal membrane protein hub.Nature chemical biology · 2025
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4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

5 authors at 4 institutions in 1 country.

Parbir S Grewal *Department of Chemical & Biomolecular Engineering, University of California, Berkeley, CA, USA.ORCID http://orcid.org/0000-0002-9364-8062
Jennifer A Samson *Department of Bioengineering, University of California, Berkeley, CA, USA.
Jordan J BakerDepartment of Bioengineering, University of California, Berkeley, CA, USA.ORCID http://orcid.org/0000-0001-6432-976X
Brian ChoiDepartment of Chemical & Biomolecular Engineering, University of California, Berkeley, CA, USA.ORCID http://orcid.org/0000-0003-2976-8577
John E DueberDepartment of Bioengineering, University of California, Berkeley, CA, USA. jdueber@berkeley.edu.ORCID http://orcid.org/0000-0001-8404-7153
University of California, Berkeley · USLawrence Berkeley National Laboratory · USPrinceton University · USSound Agriculture (United States) · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Eukaryotic cells compartmentalize metabolic pathways in organelles to achieve optimal reaction conditions and avoid crosstalk with cytosolic factors. We found that cytosolic expression of norcoclaurine synthase (NCS), the enzyme that catalyzes the first committed reaction in benzylisoquinoline alkaloid biosynthesis, is toxic in Saccharomyces cerevisiae and, consequently, restricts (S)-reticuline production. We developed a compartmentalization strategy that alleviates NCS toxicity while promoting increased (S)-reticuline titer. This strategy is achieved through efficient targeting of toxic NCS to the peroxisome while, crucially, taking advantage of the free flow of metabolite substrates and products across the peroxisome membrane. We demonstrate that expression of engineered transcription factors can mimic the oleate response for larger peroxisomes, further increasing benzylisoquinoline alkaloid titer without the requirement for peroxisome induction with fatty acids. This work specifically addresses the challenges associated with toxic NCS expression and, more broadly, highlights the potential for engineering organelles with desired characteristics for metabolic engineering.

Indexed as

Gene Expression Regulation, FungalBacterial ProteinsBenzylisoquinolinesBiological TransportCarbon-Nitrogen LigasesCell CompartmentationCytosolGenes, ReporterLuminescent ProteinsMetabolic EngineeringMetabolic Networks and PathwaysOleic AcidPeroxisomesRed Fluorescent ProteinSaccharomyces cerevisiaeSaccharomyces cerevisiae ProteinsBacterial ProteinsBenzylisoquinolinesCarbon-Nitrogen LigasesLuminescent Proteinsnorcoclaurine synthaseOleic AcidRed Fluorescent ProteinreticulineSaccharomyces cerevisiae ProteinsTranscription Factorsyellow fluorescent protein, Bacteria

Identifiers

PMID33046851
OpenAlexW3091919455

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.