Evidence map›Paper›PMID 33046754›Full record

ArticleScientific reports2020

A de novo frameshift mutation in ZEB2 causes polledness, abnormal skull shape, small body stature and subfertility in Fleckvieh cattle.

Lilian J Gehrke, Maulik Upadhyay, Kristin Heidrich, Elisabeth Kunz, Daniela Klaus-Halla, Frank Weber, Holm Zerbe, Doris Seichter, Alexander Graf, Stefan Krebs and 4 more

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
0.5field-weighted citation impact, top 28% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 8 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors at 5 institutions in 4 countries.

Lilian J Gehrke *Institute of Animal Breeding and Husbandry, Christian-Albrechts-University of Kiel, 24098, Kiel, Germany.
Maulik Upadhyay *Population Genomics Group, Department of Veterinary Sciences, Ludwig-Maximilians-University Munich, 80539, Munich, Germany.
Kristin HeidrichPopulation Genomics Group, Department of Veterinary Sciences, Ludwig-Maximilians-University Munich, 80539, Munich, Germany.
Elisabeth KunzPopulation Genomics Group, Department of Veterinary Sciences, Ludwig-Maximilians-University Munich, 80539, Munich, Germany.
Daniela Klaus-HallaClinic for Ruminants with Ambulatory and Herd Health Services, Centre for Clinical Veterinary Medicine, Ludwig-Maximilians-University Munich, 85764, Oberschleissheim, Germany.
Frank WeberClinic for Ruminants with Ambulatory and Herd Health Services, Centre for Clinical Veterinary Medicine, Ludwig-Maximilians-University Munich, 85764, Oberschleissheim, Germany.
Holm ZerbeClinic for Ruminants with Ambulatory and Herd Health Services, Centre for Clinical Veterinary Medicine, Ludwig-Maximilians-University Munich, 85764, Oberschleissheim, Germany.
Doris SeichterTierzuchtforschung E.V. München, 85586, Grub, Germany.
Alexander GrafLaboratory for Functional Genome Analysis, Gene Center, Ludwig-Maximilians-University Munich, 80539, Munich, Germany.
Stefan KrebsLaboratory for Functional Genome Analysis, Gene Center, Ludwig-Maximilians-University Munich, 80539, Munich, Germany.
Helmut BlumLaboratory for Functional Genome Analysis, Gene Center, Ludwig-Maximilians-University Munich, 80539, Munich, Germany.
Aurélien CapitanGABI, INRAE, AgroParisTech, Université Paris-Saclay, 78350, Jouy-en-Josas, France.
Georg ThallerInstitute of Animal Breeding and Husbandry, Christian-Albrechts-University of Kiel, 24098, Kiel, Germany.
Ivica MedugoracPopulation Genomics Group, Department of Veterinary Sciences, Ludwig-Maximilians-University Munich, 80539, Munich, Germany. Ivica.Medjugorac@gen.vetmed.uni-muenchen.de.
Ludwig-Maximilians-Universität München · DEInstitute of Bioinformatics and Systems Biology · DEAgroParisTech · FRAnimal Production Institute · ZAKiel University · DE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Polledness in cattle is an autosomal dominant trait. Previous studies have revealed allelic heterogeneity at the polled locus and four different variants were identified, all in intergenic regions. In this study, we report a case of polled bull (FV-Polled1) born to horned parents, indicating a de novo origin of this polled condition. Using 50K genotyping and whole genome sequencing data, we identified on chromosome 2 an 11-bp deletion (AC_000159.1:g.52364063_52364073del; Del11) in the second exon of ZEB2 gene as the causal mutation for this de novo polled condition. We predicted that the deletion would shorten the protein product of ZEB2 by almost 91%. Moreover, we showed that all animals carrying Del11 mutation displayed symptoms similar to Mowat-Wilson syndrome (MWS) in humans, which is also associated with genetic variations in ZEB2. The symptoms in cattle include delayed maturity, small body stature and abnormal shape of skull. This is the first report of a de novo dominant mutation affecting only ZEB2 and associated with a genetic absence of horns. Therefore our results demonstrate undoubtedly that ZEB2 plays an important role in the process of horn ontogenesis as well as in the regulation of overall development and growth of animals.

Indexed as

Frameshift MutationHornsAnimalsCattleCattle DiseasesDwarfismInfertilityPhenotypeSkullZinc Finger E-box Binding Homeobox 2Zinc Finger E-box Binding Homeobox 2

Identifiers

PMID33046754
PMCPMC7550345
OpenAlexW3092280952

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.